CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618802_s_at

Gene name hypothetical protein LOC100264326

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.88 95.4 1618802_s_at CF205022.1 hypothetical protein LOC100264326 - 9e-4 At1g34780 ATAPRL4 (APR-like 4) S.X. H.G.
0.42 60.1 1613769_at CB970019 hypothetical protein LOC100265267 - 4e-48 At1g51690 ATB ALPHA S.X. H.G.
0.41 58.7 1614216_at CF512284 hypothetical protein LOC100260586 - 2e-72 At1g53500 MUM4 (MUCILAGE-MODIFIED 4) S.X. H.G.
0.31 41.3 1619154_at CF212140 hypothetical protein LOC100246237 - 1e-7 At4g25770 unknown protein S.X. H.G.
0.30 39.4 1621252_at CB978314 hypothetical protein LOC100263936 - 2e-8 At3g08620 KH domain-containing protein S.X. H.G.
0.27 34.0 1622033_at CB917346 hypothetical protein LOC100251869 - 1e-25 At3g11130 clathrin heavy chain, putative S.X. H.G.
0.27 34.0 1617845_at CD800649 hypothetical protein LOC100263968 - 4e-35 At2g38630 - S.X. H.G.
0.26 32.0 1614110_s_at CD801616 cullin 1 - 2e-19 At4g02570 ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) S.X. H.G.
0.26 32.0 1617476_at CB345793 hypothetical protein LOC100246888 - 8e-12 At2g42230 tubulin-specific chaperone C-related S.X. H.G.
0.23 27.5 1620980_s_at CF209157 hypothetical protein LOC100255909 - 7e-6 At1g14685 BPC2 (BASIC PENTACYSTEINE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.6 92.5 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436414 V. riparia (VR, PI588259) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436361 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436399 V. riparia (VR, PI588259) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436364 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.64 0 704 1609604_at CF513913 hypothetical protein LOC100264326 - 2e-3 At1g34780 ATAPRL4 (APR-like 4) C.G. S.X.
0.02 6e-2 36 1608819_at CF518516 hypothetical protein LOC100266805 - 4e+0 At4g03950 glucose-6-phosphate/phosphate translocator, putative C.G. S.X.
0.04 2e-1 34 1612865_at CF203608.1 - - 3e-1 At2g37480 unknown protein C.G. S.X.
0.03 2e-1 34 1606943_at CF510910 hypothetical protein LOC100245618 - 2e+0 At2g46100 unknown protein C.G. S.X.
0.03 1e+0 32 1620291_at CB975536 hypothetical protein LOC100262070 - 3e-8 At5g60960 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.03 1e+0 32 1618246_at CF207318 - - 4e-6 At5g20470 myosin, putative C.G. S.X.
0.02 4e+0 30 1621643_at CF404242 hypothetical protein LOC100257364 - 5e-41 At5g42790 PAF1 C.G. S.X.
0.02 4e+0 30 1621578_at BM437326 - - 1e-1 At2g33270 ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3) C.G. S.X.
0.03 4e+0 30 1619923_at CF204132.1 - - 3e-32 At3g23490 CYN (CYANASE) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 9e-4 44 Arabidopsis thaliana At1g34780 840382 ATAPRL4 (APR-like 4) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. - - - C.G. S.X.
0.08 9e-20 97 Glycine max Gma.2034.1.S1_at AW277558 - - 2e-13 At4g08930 ATAPRL6 (APR-like 6) C.G. S.X.
0.04 6e+0 30 Hordeum vulgare rbaal24m19_at rbaal24m19 - - 5e-1 At4g36600 - C.G. S.X.
0.02 2e+0 34 Oryza sativa OsAffx.31255.1.S1_at - - - 0 C.G. S.X.
0.10 5e-9 61 Populus trichocarpa Ptp.1833.1.A1_at CV233188 hypothetical protein - 3e-2 At1g34780 ATAPRL4 (APR-like 4) C.G. S.X.
0.04 3e+0 32 Triticum aestivum Ta.28180.3.S1_at BE493006 - - 3e+0 At1g51400 photosystem II 5 kD protein C.G. S.X.
0.09 2e-5 48 Zea mays ZmAffx.369.1.S1_at AI673865 Adenosine 5'-phosphosulfate reductase 3 - 2e-1 At3g44710 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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