CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618718_at

Gene name hypothetical protein LOC100264252

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.70 88.6 1618718_at BQ792420 hypothetical protein LOC100264252 - 3e-4 At2g35490 plastid-lipid associated protein PAP, putative S.X. H.G.
0.80 93.6 1621382_at CA810834 hypothetical protein LOC100253458 - 3e-26 At1g70070 EMB25 (EMBRYO DEFECTIVE 25) S.X. H.G.
0.47 67.7 1614616_at CA817956 hypothetical protein LOC100252131 - 5e-12 At4g37200 HCF164 S.X. H.G.
0.47 67.7 1618651_at CB005890 hypothetical protein LOC100241531 - 5e-13 At5g52960 unknown protein S.X. H.G.
0.46 66.5 1611610_at CA818638 hypothetical protein LOC100246037 - 8e-22 At3g17240 mtLPD2 (LIPOAMIDE DEHYDROGENASE 2) S.X. H.G.
0.43 61.5 1609611_at CF608067 hypothetical protein LOC100254000 - 9e-39 At5g45390 CLPP4 (CLP PROTEASE P4) S.X. H.G.
0.39 54.9 1608792_s_at CF513346 hypothetical protein LOC100250896 - 2e-138 At5g50920 CLPC1 S.X. H.G.
0.38 53.6 1616440_at CD798130 hypothetical protein LOC100240863 - 4e-3 At5g03900 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.9 97.9 GSM147687 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 16
4.7 97.7 GSM147705 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 34
4.0 96.7 GSM322370 genotype: Incrocio Manzoni - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.8 96.4 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.6 96.0 GSM147686 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 15
3.5 95.7 GSM147693 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 22
3.4 95.5 GSM147699 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 28
3.2 94.9 GSM147681 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 10
3.2 94.9 GSM322366 genotype: Chardonnay - disease type: Healthy - rep3 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.1 94.6 GSM147674 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 3
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 9e-2 36 1618966_at CF605835 - - 1e-1 At5g67490 unknown protein C.G. S.X.
0.03 4e-1 34 1615700_at CA809560 similar to VPS24.1 - 2e-8 At5g22950 VPS24.1 C.G. S.X.
0.02 2e+0 32 1616159_x_at CF206571.1 - - 2e-24 At1g08200 AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2) C.G. S.X.
0.02 2e+0 32 1614681_at CF206571.1 - - 2e-24 At1g08200 AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2) C.G. S.X.
0.02 6e+0 30 1622011_at CB973350 - - 7e-6 Atcg00670 - C.G. S.X.
0.02 6e+0 30 1621786_at CB914345 hypothetical protein LOC100249921 - 2e-3 At5g67490 unknown protein C.G. S.X.
0.02 6e+0 30 1621530_at CF403816 hypothetical protein LOC100241458 - 3e-1 At2g46140 late embryogenesis abundant protein, putative / LEA protein, putative C.G. S.X.
0.03 6e+0 30 1620087_at CF414944 hypothetical protein LOC100250448 - 4e+0 At5g48860 unknown protein C.G. S.X.
0.02 6e+0 30 1617565_at CD008058 - - 3e-1 At2g04020 GDSL-motif lipase/hydrolase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-4 46 Arabidopsis thaliana At2g35490 818114 plastid-lipid associated protein PAP, putative F:structural molecule activity;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule;PBOM - - - C.G. S.X.
0.04 2e-6 54 Glycine max GmaAffx.13903.1.S1_at CD405702 - - 3e-9 At2g35490 plastid-lipid associated protein PAP, putative C.G. S.X.
0.02 6e-1 34 Hordeum vulgare Contig7863_at Contig7863 - - 6e+0 At5g28450 chlorophyll A-B binding protein, chloroplast, putative / LHCI type II CAB, putative C.G. S.X.
0.04 2e+0 34 Oryza sativa OsAffx.5712.1.S1_at - - - 0 C.G. S.X.
0.13 8e-9 61 Populus trichocarpa PtpAffx.5569.1.S1_at CV244081 hypothetical protein - 2e+0 At1g25420 unknown protein C.G. S.X.
0.04 8e-2 38 Triticum aestivum Ta.8198.1.S1_at BQ161586 - - 3e-1 At3g42310 unknown protein C.G. S.X.
0.03 2e+0 32 Zea mays ZmAffx.946.1.A1_at AI833386 octicosapeptide/Phox/Bem1p - 3e+0 At5g48200 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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