Gene omics information

Query gene ID	1618703_at
Gene name	hypothetical protein LOC100249546
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	84.3	1618703_at	CB346386	hypothetical protein LOC100249546	-	6e-2	At2g47350	PAPA-1-like family protein / zinc finger (HIT type) family protein	S.X.	H.G.	Please select
0.95	99.6	1606845_at	CF212991	hypothetical protein LOC100257315	-	1e+0	At3g52510	-	S.X.	H.G.	Please select
0.91	98.8	1616735_at	CF604749	hypothetical protein LOC100257315	-	1e+0	At5g50470	NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7)	S.X.	H.G.	Please select
0.90	95.6	1622012_at	CF204966.1	-	-	2e-2	At1g62760	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select
0.90	95.6	1617334_s_at	CF607954	-	-	1e-9	At5g65660	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.86	95.1	1606462_at	CA817195	hypothetical protein LOC100248701	-	1e+0	At1g04970	lipid-binding serum glycoprotein family protein	S.X.	H.G.	Please select
0.86	95.1	1606429_at	CF373019	hypothetical protein LOC100251832	-	2e-1	At4g12390	PME1 (PECTIN METHYLESTERASE INHIBITOR 1)	S.X.	H.G.	Please select
0.86	95.1	1621244_s_at	CD797552	hypothetical protein LOC100246875	-	2e-5	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select
0.84	94.8	1618561_at	CF204500.1	hypothetical protein LOC100246875	-	2e-5	At3g03980	short-chain dehydrogenase/reductase (SDR) family protein	S.X.	H.G.	Please select
0.80	93.6	1612288_at	CB969093	-	-	3e-1	At4g09040	RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.7	100.0	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
25.8	100.0	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
24.5	100.0	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
22.4	100.0	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
22.0	100.0	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
17.8	99.9	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
13.8	99.8	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
11.3	99.7	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
10.7	99.7	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.3	99.6	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	34	1613293_at	CF518513	hypothetical protein LOC100251356	-	5e-10	At4g11560	bromo-adjacent homology (BAH) domain-containing protein	C.G.	S.X.	Please select
0.03	1e+0	32	1621372_at	CF405876	hypothetical protein LOC100264642	-	8e-11	At4g29120	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	C.G.	S.X.	Please select
0.02	1e+0	32	1611072_at	CF371842	hypothetical protein LOC100265691	-	1e-4	At2g35120	glycine cleavage system H protein, mitochondrial, putative	C.G.	S.X.	Please select
0.02	1e+0	32	1609147_at	CB979150	hypothetical protein LOC100256452	-	3e-15	At1g04410	malate dehydrogenase, cytosolic, putative	C.G.	S.X.	Please select
0.02	1e+0	32	1608888_at	CF208466	hypothetical protein LOC100258013	-	2e-13	At4g25130	peptide methionine sulfoxide reductase, putative	C.G.	S.X.	Please select
0.03	1e+0	32	1608366_at	CB981300	hypothetical protein LOC100250312	-	1e+0	At5g12230	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1607909_at	CF405747	hypothetical protein LOC100263657	-	6e-2	At4g26940	galactosyltransferase family protein	C.G.	S.X.	Please select
0.02	1e+0	32	1606675_at	CB006583	hypothetical protein LOC100241072	-	1e-97	At3g02780	IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2)	C.G.	S.X.	Please select
0.02	5e+0	30	1622630_s_at	CF209498	hypothetical protein LOC100253858	-	1e-29	At2g41250	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-2	38	Arabidopsis thaliana	At2g47350	819348	PAPA-1-like family protein / zinc finger (HIT type) family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e-2	40	Glycine max	Gma.7241.1.S1_at	CD418665	-	-	5e+0	At5g25080	-	C.G.	S.X.	Please select
0.04	5e-1	34	Hordeum vulgare	HV_CEb0022B03r2_x_at	HV_CEb0022B03r2	-	-	8e-1	At1g29580	unknown protein	C.G.	S.X.	Please select
0.09	3e-2	40	Oryza sativa	Os04g0581700	AK063676.1	-	Hypothetical protein	1e+0	At1g11430	plastid developmental protein DAG, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	9e-5	48	Populus trichocarpa	PtpAffx.46129.1.S1_at	CV230659	hypothetical protein	-	4e+0	At2g38646	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	1e-9	63	Triticum aestivum	Ta.26479.1.A1_at	CD490988	-	-	1e+0	At3g27770	unknown protein	C.G.	S.X.	Please select
0.06	5e-4	44	Zea mays	Zm.8571.1.A1_at	BM348144	hypothetical protein LOC100276153	-	1e-3	At4g18205	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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