Gene omics information

Query gene ID	1618607_s_at
Gene name	hypothetical protein LOC100255358
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1618607_s_at	CB972339	hypothetical protein LOC100255358	-	1e-3	At1g55910	ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)	S.X.	H.G.	Please select
0.77	92.3	1610914_at	CF203251.1	-	-	3e+0	At4g04745	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1608259_at	CF205412.1	hypothetical protein LOC100255358	-	2e-6	At5g59520	ZIP2	S.X.	H.G.	Please select
0.50	72.7	1612725_at	CF207946	-	-	9e-12	At2g38170	CAX1 (cation exchanger 1)	S.X.	H.G.	Please select
0.44	64.1	1617237_s_at	CF207946	-	-	9e-12	At2g38170	CAX1 (cation exchanger 1)	S.X.	H.G.	Please select
0.36	50.7	1620683_at	CA811381	hypothetical protein LOC100245630	-	8e-9	At4g26160	ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.6	99.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
7.2	99.1	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
6.9	99.1	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
6.5	98.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
6.4	98.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
6.3	98.8	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
6.1	98.7	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
6.0	98.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
5.8	98.6	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
5.6	98.4	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.65	0	747	1608259_at	CF205412.1	hypothetical protein LOC100255358	-	2e-6	At5g59520	ZIP2	C.G.	S.X.	Please select
0.03	3e-10	63	1613993_at	CB342665	hypothetical protein LOC100253257	-	2e-7	At1g55910	ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)	C.G.	S.X.	Please select
0.03	3e-1	34	1613818_at	BQ792651	hypothetical protein LOC100258929	-	2e-27	At5g22080	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.03	3e-1	34	1612399_at	CB340153	-	-	1e-16	At1g50260	NTMC2T5.1 (N-TERMINAL-TRANSMEMBRANE-C2 DOMAIN TYPE 5.1)	C.G.	S.X.	Please select
0.04	3e-1	34	1610810_at	CA817584	-	-	1e+0	At5g27260	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	32	1614662_at	CF212195	hypothetical protein LOC100244419	-	1e-110	At1g79550	PGK (PHOSPHOGLYCERATE KINASE)	C.G.	S.X.	Please select
0.03	1e+0	32	1613280_at	CF517504	hypothetical protein LOC100262630	-	1e-3	At1g33750	terpene synthase/cyclase family protein	C.G.	S.X.	Please select
0.03	1e+0	32	1610038_at	CF516172	hypothetical protein LOC100262968	-	2e-11	At5g21280	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	5e+0	30	1621492_at	CB978828	similar to 60S ribosomal protein L19	-	4e-66	At3g16780	60S ribosomal protein L19 (RPL19B)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-3	44	Arabidopsis thaliana	At1g55910	842041	ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)	member of Putative zinc transporter ZIP2 - like family	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	2e-5	50	Glycine max	GmaAffx.764.1.S1_at	BE821100	-	-	1e-6	At1g55910	ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	HVSMEc0012N05r2_at	HVSMEc0012N05r2	-	-	7e-5	At1g33420	PHD finger family protein	C.G.	S.X.	Please select
0.04	2e+0	34	Oryza sativa	OsAffx.3189.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.47	2e-18	93	Populus trichocarpa	Ptp.7632.1.S1_at	DN497977	ZIP transporter	-	2e-1	At5g59520	ZIP2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e+0	32	Triticum aestivum	TaAffx.98077.1.A1_at	BQ168799	-	-	3e+0	At1g44478	-	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.1063.1.A1_at	AI881959	-	-	8e-1	At1g52415	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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