Gene omics information

Query gene ID	1618602_at
Gene name	hypothetical protein LOC100267246
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.7	1618602_at	CD712496	hypothetical protein LOC100267246	-	4e-7	At1g79650	RAD23	S.X.	H.G.	Please select
0.71	89.5	1613189_at	CB978637	hypothetical protein LOC100263471	-	8e-2	At1g58245	-	S.X.	H.G.	Please select
0.61	83.2	1613303_at	CB977627	similar to plectin-related	-	3e-16	At2g26770	plectin-related	S.X.	H.G.	Please select
0.53	75.2	1621288_at	CB972014	hypothetical protein LOC100252015	-	2e+0	At5g50030	invertase/pectin methylesterase inhibitor family protein	S.X.	H.G.	Please select
0.47	67.7	1613901_at	CF510714	hypothetical protein LOC100254714	-	2e-2	At3g03340	UNE6 (unfertilized embryo sac 6)	S.X.	H.G.	Please select
0.44	64.1	1622877_at	CF514743	hypothetical protein LOC100244334	-	2e+0	At1g70400	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.3	95.2	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.5	91.9	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436374	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436412	V. riparia (VR, PI588259) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	36	1608527_at	CF515950	hypothetical protein LOC100265888	-	1e-42	At5g51970	sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative	C.G.	S.X.	Please select
0.03	5e-1	34	1613650_at	CF404435	hypothetical protein LOC100245905	-	3e-1	At3g24225	CLE19 (CLAVATA3/ESR-RELATED 19)	C.G.	S.X.	Please select
0.03	5e-1	34	1609903_at	CF516465	hypothetical protein LOC100256148	-	4e+0	At5g02200	FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)	C.G.	S.X.	Please select
0.02	2e+0	32	1620647_at	BQ796013	hypothetical protein LOC100261082	-	9e-5	At1g19140	-	C.G.	S.X.	Please select
0.02	2e+0	32	1618008_at	BQ797845	hypothetical LOC100242416	-	8e-6	At2g35120	glycine cleavage system H protein, mitochondrial, putative	C.G.	S.X.	Please select
0.02	2e+0	32	1617485_at	CF209626	-	-	2e-8	At5g66080	protein phosphatase 2C family protein / PP2C family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1616699_at	BM437296	-	-	2e-3	At4g00030	plastid-lipid associated protein PAP / fibrillin family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1611983_at	BM437296	hypothetical protein LOC100244472	-	2e-3	At4g00030	plastid-lipid associated protein PAP / fibrillin family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1611328_at	CF512075	hypothetical protein LOC100257988	-	3e-57	At3g54560	HTA11	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	4e-7	56	Arabidopsis thaliana	At1g79650	844304	RAD23	putative DNA repair protein RAD23	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-4	46	Glycine max	Gma.2983.1.S1_at	AW152872	-	-	3e-11	At1g79650	RAD23	C.G.	S.X.	Please select
0.03	1e+1	30	Hordeum vulgare	HV06K22u_at	HV06K22u	-	-	9e+0	At3g49645	unknown protein	C.G.	S.X.	Please select
0.03	3e+0	34	Oryza sativa	OsAffx.5725.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	9e-3	42	Populus trichocarpa	PtpAffx.677.2.S1_at	CV267907	-	-	4e-24	At1g16190	DNA repair protein RAD23, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	7e+0	32	Triticum aestivum	TaAffx.115144.1.S1_at	CA484641	-	-	2e+1	At5g13050	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)	C.G.	S.X.	Please select
0.03	1e+1	30	Zea mays	ZmAffx.1103.1.A1_at	AW191100	-	-	1e+1	At5g43700	ATAUX2-11 (AUXIN INDUCIBLE 2-11)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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