Gene omics information

Query gene ID	1618595_at
Gene name	hypothetical protein LOC100248440
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1618595_at	BQ798258	hypothetical protein LOC100248440	-	5e-1	At4g10950	GDSL-motif lipase/hydrolase family protein	S.X.	H.G.	Please select
0.83	94.6	1621251_s_at	BQ795002	hypothetical protein LOC100265471	-	2e+1	Atmg00500	-	S.X.	H.G.	Please select
0.83	94.6	1608585_x_at	BQ797013	proline-rich cell wall protein-like	-	7e-7	At3g07910	-	S.X.	H.G.	Please select
0.83	94.6	1615212_at	CF406027	ripening-related protein-like	-	8e+0	At5g64040	PSAN	S.X.	H.G.	Please select
0.73	90.8	1610418_at	BQ798078	hypothetical protein LOC100245385	-	8e-13	At1g20190	ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)	S.X.	H.G.	Please select
0.59	80.6	1621698_at	BQ796130	similar to bHLH transcription factor Upa20	-	8e-2	At3g20510	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.5	99.7	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
11.4	99.7	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
11.3	99.7	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
11.2	99.7	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.3	99.6	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.2	99.6	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.9	99.6	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.7	99.6	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.4	99.6	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.3	99.6	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-1	34	1613048_at	CB002467	-	-	5e-1	At4g03140	binding / catalytic/ oxidoreductase	C.G.	S.X.	Please select
0.03	5e-1	34	1609269_at	CB002467	hypothetical protein LOC100255259	-	5e-1	At4g03140	binding / catalytic/ oxidoreductase	C.G.	S.X.	Please select
0.02	2e+0	32	1622012_at	CF204966.1	-	-	2e-2	At1g62760	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1621517_s_at	CF204966.1	hypothetical protein LOC100250066	-	2e-2	At1g62760	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1617320_at	CB343024	hypothetical protein LOC100250066	-	8e-3	At2g01610	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.01	2e+0	32	1615029_at	BQ796543	-	-	3e-34	At1g57720	elongation factor 1B-gamma, putative / eEF-1B gamma, putative	C.G.	S.X.	Please select
0.02	2e+0	32	1613249_at	CF210498	hypothetical protein LOC100251410	-	2e-36	At3g14450	CID9 (CTC-Interacting Domain 9)	C.G.	S.X.	Please select
0.01	2e+0	32	1608078_s_at	CB346850	hypothetical LOC100252101	-	8e-1	At3g06750	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.01	8e+0	30	1621944_at	CA817687	hypothetical protein LOC100255859	-	8e-118	At2g21330	fructose-bisphosphate aldolase, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-1	36	Arabidopsis thaliana	At4g10950	826694	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;PBFOM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-1	36	Glycine max	HgAffx.20567.1.S1_at	CB375508	-	-	4e+0	At3g18518	RTFL20 (ROTUNDIFOLIA LIKE 20)	C.G.	S.X.	Please select
0.04	6e-5	48	Hordeum vulgare	Contig4527_x_at	Contig4527	-	-	9e+0	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	C.G.	S.X.	Please select
0.04	4e-6	54	Oryza sativa	Os.15281.1.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e-4	48	Populus trichocarpa	Ptp.7446.1.S1_at	BU814736	hypothetical protein	-	2e+0	At3g21710	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	5e-1	36	Triticum aestivum	TaAffx.4927.1.S1_at	CA728433	-	-	4e+0	At1g69920	ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12)	C.G.	S.X.	Please select
0.03	3e+0	32	Zea mays	ZmAffx.771.1.A1_at	AI746147	-	-	8e-1	At1g67920	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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