CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618545_a_at

Gene name hypothetical LOC100265979

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 92.3 1618545_a_at CB346750 hypothetical LOC100265979 - 2e-50 At1g12270 stress-inducible protein, putative S.X. H.G.
0.44 64.1 1613154_at CB346750 hypothetical LOC100265979 - 2e-50 At1g12270 stress-inducible protein, putative S.X. H.G.
0.40 57.7 1616706_at CF207563 hypothetical LOC100265979 - 8e-11 At4g12400 stress-inducible protein, putative S.X. H.G.
0.40 57.7 1611766_at CF371956 hypothetical protein LOC100248418 - 5e+0 Atmg00150 - S.X. H.G.
0.22 25.6 1610802_s_at CD802327 hypothetical protein LOC100247363 - 2e-5 At4g09070 - S.X. H.G.
0.14 14.4 1615024_at CB911127 hypothetical protein LOC100261826 - 2e-27 At2g05840 PAA2 (20S PROTEASOME SUBUNIT PAA2) S.X. H.G.
0.08 8.5 1613432_at CF516959 hypothetical protein LOC100244217 - 1e-15 At1g67680 7S RNA binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.6 98.4 GSM436368 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM287887 Green soft berry C23 from plant 2 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.3 90.7 GSM436364 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436391 V. riparia (VR, PI588259) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436346 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436415 V. riparia (VR, PI588259) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 1632 1613154_at CB346750 hypothetical LOC100265979 - 2e-50 At1g12270 stress-inducible protein, putative C.G. S.X.
0.09 5e-49 194 1616706_at CF207563 hypothetical LOC100265979 - 8e-11 At4g12400 stress-inducible protein, putative C.G. S.X.
0.01 3e-1 36 1611826_at CB977629 hypothetical protein LOC100262670 - 2e-9 At4g25500 ATRSP35 C.G. S.X.
0.01 1e+0 34 1622840_at CF213749 hypothetical protein LOC100251026 - 3e-39 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
0.01 1e+0 34 1617444_s_at CF373801 hypothetical protein LOC100243312 - 3e-4 At3g45140 LOX2 (LIPOXYGENASE 2) C.G. S.X.
0.01 1e+0 34 1608892_at CF373801 hypothetical protein LOC100243312 - 3e-4 At3g45140 LOX2 (LIPOXYGENASE 2) C.G. S.X.
0.01 4e+0 32 1621788_at BQ800383 hypothetical protein LOC100266637 - 3e-2 At1g71780 unknown protein C.G. S.X.
0.01 4e+0 32 1619131_at CB973000 - - 1e+0 At4g03070 AOP1 C.G. S.X.
0.01 4e+0 32 1618396_at CF373590 hypothetical protein LOC100261671 - 1e-7 At3g27030 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.40 2e-50 200 Arabidopsis thaliana At1g12270 837781 stress-inducible protein, putative F:binding;P:response to stress;C:unknown;OMBPFAV - - - C.G. S.X.
0.42 2e-101 371 Glycine max Gma.8435.1.S1_at X79770.1 stress inducible protein - 1e-61 At1g62740 stress-inducible protein, putative C.G. S.X.
0.21 2e-33 143 Hordeum vulgare Contig7425_at Contig7425 - - 2e-41 At1g62740 stress-inducible protein, putative C.G. S.X.
0.23 2e-55 218 Oryza sativa Os02g0644100 AK102431.1 - Heat shock protein STI (Stress inducible protein)(GmSTI) 6e-33 At1g62740 stress-inducible protein, putative C.G. S.X.
0.41 3e-140 500 Populus trichocarpa PtpAffx.215660.1.S1_s_at pmrna29980 hypothetical protein - 1e-64 At4g12400 stress-inducible protein, putative C.G. S.X.
0.16 2e-29 131 Triticum aestivum Ta.8679.1.S1_x_at CK157404 - - 1e-9 At1g62740 stress-inducible protein, putative C.G. S.X.
0.23 2e-21 103 Zea mays Zm.2497.1.S1_at AY107480.1 hypothetical protein LOC100272917 - 3e-55 At4g12400 stress-inducible protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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