CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618355_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 75.2 1618355_at CB837772 - - 1e+0 At2g16750 protein kinase family protein S.X. H.G.
0.67 87.9 1607713_s_at AF487826.1 serine hydrolase-like - 1e-1 At4g26210 mitochondrial ATP synthase g subunit family protein S.X. H.G.
0.63 84.3 1615458_at CB969727 hypothetical protein LOC100255664 - 2e+0 At5g16490 RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4) S.X. H.G.
0.57 79.8 1618260_s_at CD799434 hypothetical protein LOC100254518 - 3e-1 At1g73830 BEE3 (BR ENHANCED EXPRESSION 3) S.X. H.G.
0.50 72.7 1614141_at CA817693 hypothetical protein LOC100265131 - 1e-9 At2g31090 unknown protein S.X. H.G.
0.48 68.8 1612482_at CA809174 hypothetical protein LOC100258468 - 1e-9 At1g60440 ATPANK1 (PANTOTHENATE KINASE 1) S.X. H.G.
0.40 57.7 1610920_at CB979986 hypothetical protein LOC100257224 - 7e-14 At4g36910 LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.9 100.0 GSM299457 C_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
27.5 100.0 GSM299456 C_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
22.5 100.0 GSM299453 B_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
15.3 99.9 GSM299461 C_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
13.9 99.8 GSM299454 B_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
11.4 99.7 GSM299459 D_i_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.5 99.6 GSM299462 D_ni_rep1 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.2 99.5 GSM299455 C_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.6 98.9 GSM299460 D_i_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.3 98.8 GSM299458 D_ni_rep2 GSE11857 Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.98 0 807 1622140_at CB837772 - - 1e+0 At2g16750 protein kinase family protein C.G. S.X.
0.03 2e+0 32 1618584_at CD720161 - - 3e+0 At4g35480 RHA3B C.G. S.X.
0.02 2e+0 32 1617486_at CF210846 hypothetical protein LOC100267528 - 3e-9 At3g15340 PPI2 (proton pump interactor 2) C.G. S.X.
0.03 2e+0 32 1614774_at CF605029 hypothetical protein LOC100245929 - 3e+0 At4g35480 RHA3B C.G. S.X.
0.02 6e+0 30 1622700_at CF516801 hypothetical LOC100248029 - 9e-2 At5g55200 co-chaperone grpE protein, putative C.G. S.X.
0.03 6e+0 30 1622415_at CF519029 - - 4e+0 At4g04953 unknown protein C.G. S.X.
0.02 6e+0 30 1622038_at CB005431 hypothetical protein LOC100251859 - 8e-2 At5g41850 unknown protein C.G. S.X.
0.01 6e+0 30 1621811_at CB341999 SINA2p - 5e-48 At3g58040 SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2) C.G. S.X.
0.02 6e+0 30 1620752_s_at CA809260 hypothetical protein LOC100247586 /// hypothetical protein LOC100242453 - 2e-1 At1g59950 aldo/keto reductase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+0 34 Arabidopsis thaliana At2g16750 816176 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA - - - C.G. S.X.
0.03 7e+0 32 Glycine max GmaAffx.42349.2.S1_at BG653753 - - 4e+0 At5g48280 unknown protein C.G. S.X.
0.03 3e+0 32 Hordeum vulgare HVSMEl0009L02r2_at HVSMEl0009L02r2 - - 8e-2 At5g55970 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 6e-1 36 Oryza sativa OsAffx.10213.1.A1_at - - - 0 C.G. S.X.
0.09 1e-19 97 Populus trichocarpa PtpAffx.211792.1.S1_at pmrna23129 hypothetical protein - 8e-32 At5g35960 protein kinase, putative C.G. S.X.
0.05 1e+0 34 Triticum aestivum Ta.3983.1.S1_at CK202188 - - 4e-11 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
0.04 4e-2 38 Zea mays Zm.2220.4.A1_a_at AY110053.1 Hypothetical protein LOC100216733 - 1e-1 At5g16500 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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