Gene omics information

Query gene ID	1618312_at
Gene name	hypothetical protein LOC100240958
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1618312_at	CB976210	hypothetical protein LOC100240958	-	8e-2	At1g22540	proton-dependent oligopeptide transport (POT) family protein	S.X.	H.G.	Please select
0.59	80.6	1611173_at	CB979091	hypothetical protein LOC100258969	-	1e+0	At3g25080	unknown protein	S.X.	H.G.	Please select
0.55	77.3	1614771_at	CB346222	hypothetical protein LOC100242179	-	1e+0	At5g62200	embryo-specific protein-related	S.X.	H.G.	Please select
0.53	75.2	1617980_at	CB346475	-	-	8e-1	At5g66800	unknown protein	S.X.	H.G.	Please select
0.53	75.2	1613161_at	BQ792976	hypothetical protein LOC100257921	-	3e+0	At4g18860	unknown protein	S.X.	H.G.	Please select
0.50	72.7	1615925_at	BQ793198	hypothetical protein LOC100260124	-	3e-4	At4g10020	AtHSD5 (hydroxysteroid dehydrogenase 5)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.6	99.9	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
17.6	99.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
13.1	99.8	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
12.8	99.8	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
11.4	99.7	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.5	99.7	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.1	99.6	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
10.0	99.6	GSM287886	Green soft berry C22 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.8	99.6	GSM287871	Green hard berry C4 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.2	99.5	GSM287877	Green hard berry B12 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	2e-70	264	1607813_at	CF516148	similar to oligopeptide transporter, putative	-	8e-9	At1g72140	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please select
0.04	1e+0	32	1620329_at	CB343049	-	-	5e+0	At4g12590	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1619755_s_at	BM436434	hypothetical protein LOC100255467	-	1e+0	At3g57400	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1615931_s_at	BM436434	-	-	1e+0	At3g57400	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1615644_at	CF372178	hypothetical protein LOC100264318	-	1e+0	At5g09310	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	1611896_at	CB347292	hypothetical protein LOC100255930	-	1e-6	At2g02040	PTR2 (PEPTIDE TRANSPORTER 2)	C.G.	S.X.	Please select
0.02	1e+0	32	1608189_s_at	BQ800538	hypothetical protein LOC100247958	-	1e-21	At3g11410	PP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)	C.G.	S.X.	Please select
0.03	1e+0	32	1607609_at	CK138146.1	hypothetical protein LOC100255467	-	2e+0	At3g15578	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1607215_at	CB975900	-	-	4e+0	At4g14420	lesion inducing protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-2	38	Arabidopsis thaliana	At1g22540	838860	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	1e-7	57	Glycine max	GmaAffx.7044.1.S1_at	BE658355	-	-	3e-11	At1g22540	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please select
0.05	4e-2	38	Hordeum vulgare	Contig7895_at	Contig7895	-	-	2e+0	At4g08406	unknown protein	C.G.	S.X.	Please select
0.03	6e-1	36	Oryza sativa	Os01g0871500	AK068840.1	-	TGF-beta receptor, type I/II extracellular regionfamily protein	6e-2	At1g72125	transporter	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.46	1e-44	180	Populus trichocarpa	PtpAffx.18805.1.S1_at	CV232974	-	-	6e-3	At1g22540	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	3e-4	46	Triticum aestivum	Ta.12441.1.A1_at	BQ172342	-	-	4e-2	At1g72140	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.6699.1.A1_at	AI374583	-	-	2e-2	At2g17770	ATBZIP27	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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