Gene omics information

Query gene ID	1618265_at
Gene name	hypothetical protein LOC100244806
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.54	75.7	1618265_at	CF403167	hypothetical protein LOC100244806	-	8e-86	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	S.X.	H.G.	Please select
0.59	80.6	1613809_at	CF372821	hypothetical protein LOC100247494	-	3e-50	At1g69340	appr-1-p processing enzyme family protein	S.X.	H.G.	Please select
0.57	79.8	1615016_at	BQ794197	hypothetical protein LOC100241603	-	7e-2	At3g14480	glycine/proline-rich protein	S.X.	H.G.	Please select
0.47	67.7	1616450_at	BQ797532	hypothetical protein LOC100264578	-	3e-23	At1g48790	mov34 family protein	S.X.	H.G.	Please select
0.44	64.1	1610114_at	CD003699	similar to SPla/RYanodine receptor (SPRY) domain-containing protein	-	8e+0	At5g51710	KEA5	S.X.	H.G.	Please select
0.29	37.7	1609250_at	Y18471.1	SINA1p	-	2e-60	At3g61790	seven in absentia (SINA) family protein	S.X.	H.G.	Please select
0.29	37.7	1620213_at	CB981229	hypothetical protein LOC100252268	-	5e-1	At1g13600	AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58)	S.X.	H.G.	Please select
0.27	34.0	1606664_at	CF207540	hypothetical protein LOC100255704	-	2e-13	At1g70320	UPL2 (UBIQUITIN-PROTEIN LIGASE 2)	S.X.	H.G.	Please select
0.17	18.2	1618348_at	CF373264	hypothetical protein LOC100265921	-	1e-47	At5g45750	AtRABA1c (Arabidopsis Rab GTPase homolog A1c)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.2	97.1	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436382	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.40	2e-46	184	1614132_at	CF415786	hypothetical protein LOC100253472	-	1e-25	At1g63800	UBC5 (ubiquitin-conjugating enzyme 5)	C.G.	S.X.	Please select
0.13	2e-16	85	1616995_at	CB976742	-	-	2e-22	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	C.G.	S.X.	Please select
0.02	5e-1	34	1620975_at	BQ798236	hypothetical protein LOC100258366	-	7e-55	At1g11890	SEC22	C.G.	S.X.	Please select
0.01	5e-1	34	1620654_at	CF514699	hypothetical protein LOC100262551	-	1e-64	At3g60750	transketolase, putative	C.G.	S.X.	Please select
0.01	5e-1	34	1618061_a_at	CF514699	hypothetical protein LOC100262607	-	1e-64	At3g60750	transketolase, putative	C.G.	S.X.	Please select
0.02	5e-1	34	1614787_at	CF207564	hypothetical protein LOC100241423	-	1e-18	At2g27900	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	34	1610792_at	CD714708	-	-	1e-6	At3g08510	ATPLC2 (PHOSPHOLIPASE C 2)	C.G.	S.X.	Please select
0.02	5e-1	34	1606940_at	CD714708	hypothetical protein LOC100263805	-	1e-6	At3g08510	ATPLC2 (PHOSPHOLIPASE C 2)	C.G.	S.X.	Please select
0.02	2e+0	32	1619625_s_at	CF214740	hypothetical protein LOC100242662	-	9e-24	At3g55750	60S ribosomal protein L35a (RPL35aD)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.50	8e-86	317	Arabidopsis thaliana	At5g41340	834136	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.52	5e-125	448	Glycine max	GmaAffx.92634.1.A1_x_at	CF809148	-	-	3e-57	At1g63800	UBC5 (ubiquitin-conjugating enzyme 5)	C.G.	S.X.	Please select
0.38	2e-63	242	Hordeum vulgare	Contig5962_at	Contig5962	-	-	2e-40	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	C.G.	S.X.	Please select
0.16	1e-52	208	Oryza sativa	Os10g0447100	AK120481.1	-	Ubiquitin-conjugating enzyme E2-21 kDa 2 (EC6.3.2.19) (Ubiquitin- protein ligase 5) (Ubiquitincarrier protein 5)	2e-34	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.48	4e-144	511	Populus trichocarpa	PtpAffx.49864.1.S1_at	CV280846	hypothetical protein	-	1e-81	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.37	1e-63	244	Triticum aestivum	Ta.23803.1.A1_at	BJ318318	-	-	9e-46	At1g63800	UBC5 (ubiquitin-conjugating enzyme 5)	C.G.	S.X.	Please select
0.36	6e-48	190	Zea mays	Zm.1224.1.A1_at	CF634479	hypothetical protein LOC100194405	-	7e-34	At5g41340	UBC4 (UBIQUITIN CONJUGATING ENZYME 4)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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