Gene omics information

Query gene ID	1618237_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1618237_at	CF209673	-	-	2e+0	At1g22885	unknown protein	S.X.	H.G.	Please select
0.32	43.1	1620933_at	CB970393	-	-	4e-3	At3g55500	ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)	S.X.	H.G.	Please select
0.32	43.1	1617623_at	CF511284	-	-	2e+0	At2g36430	unknown protein	S.X.	H.G.	Please select
0.23	27.5	1608754_at	CB980267	-	-	3e-1	At4g01430	nodulin MtN21 family protein	S.X.	H.G.	Please select
0.03	4.2	1618360_at	CF204032.1	-	-	5e-13	At2g32080	PUR ALPHA-1	S.X.	H.G.	Please select
0.01	2.1	1618926_at	CB976221	-	-	6e-1	At5g22608	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
18.7	99.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
8.0	99.3	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
7.8	99.3	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
7.4	99.2	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
6.7	99.0	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
6.4	98.9	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
6.0	98.7	GSM147707	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	36
5.9	98.6	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
5.9	98.6	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
5.4	98.3	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	5e-1	34	1622646_at	CD715208	-	-	1e+0	At2g16710	hesB-like domain-containing protein	C.G.	S.X.	Please select
0.02	5e-1	34	1621715_at	CD721690	-	-	5e+0	At5g09463	CPuORF41 (Conserved peptide upstream open reading frame 41)	C.G.	S.X.	Please select
0.02	5e-1	34	1621226_at	CF205817.1	-	-	1e-19	At4g31700	RPS6 (RIBOSOMAL PROTEIN S6)	C.G.	S.X.	Please select
0.02	5e-1	34	1620852_at	CF212335	-	-	5e+0	At4g35190	unknown protein	C.G.	S.X.	Please select
0.01	5e-1	34	1620767_at	BQ800601	glutamine synthetase	-	9e-47	At1g66200	ATGSR2	C.G.	S.X.	Please select
0.02	5e-1	34	1620724_at	CB915307	hypothetical protein LOC100245746	-	3e-7	At4g29220	PFK1 (PHOSPHOFRUCTOKINASE 1)	C.G.	S.X.	Please select
0.02	5e-1	34	1619509_at	CB344814	-	-	6e+0	At4g26030	transcription factor	C.G.	S.X.	Please select
0.03	5e-1	34	1612295_at	CF512417	-	-	7e-32	At5g56630	PFK7 (PHOSPHOFRUCTOKINASE 7)	C.G.	S.X.	Please select
0.02	5e-1	34	1609964_at	CD715208	-	-	1e+0	At2g16710	hesB-like domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	2e+0	34	Arabidopsis thaliana	At1g22885	838895	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	6e-1	36	Glycine max	GmaAffx.52169.1.S1_at	CA936562	-	-	8e+0	At5g44900	transmembrane receptor	C.G.	S.X.	Please select
0.03	2e-1	36	Hordeum vulgare	HD06M10r_at	HD06M10r	-	-	6e-2	At5g63460	SAP domain-containing protein	C.G.	S.X.	Please select
0.03	2e-1	38	Oryza sativa	Os.17615.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	4e-2	40	Populus trichocarpa	PtpAffx.7625.4.S1_a_at	CX174671	hypothetical protein	-	5e-24	At1g53240	malate dehydrogenase (NAD), mitochondrial	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-1	38	Triticum aestivum	Ta.5603.1.A1_at	BJ286068	-	-	7e-11	At3g27020	YSL6 (YELLOW STRIPE LIKE 6)	C.G.	S.X.	Please select
0.03	7e-1	34	Zea mays	Zm.17351.1.S1_at	CK371377	-	-	1e+0	At1g08110	lactoylglutathione lyase, putative / glyoxalase I, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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