CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618230_at

Gene name hypothetical protein LOC100245789

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 83.2 1618230_at CD801769 hypothetical protein LOC100245789 - 2e+0 At4g21090 adrenodoxin-like ferredoxin 1 S.X. H.G.
0.67 87.9 1607578_at CF415519 hypothetical protein LOC100247175 - 1e+0 At5g57000 unknown protein S.X. H.G.
0.55 77.3 1611253_at CD798640 - - 2e-1 At1g75060 unknown protein S.X. H.G.
0.55 77.3 1616870_at CF202454.1 - - 2e+0 At5g46490 disease resistance protein (TIR-NBS class), putative S.X. H.G.
0.50 72.7 1608238_at BQ800567 hypothetical protein LOC100247004 - 1e+0 At1g56660 unknown protein S.X. H.G.
0.28 37.7 1607676_at CB983117 hypothetical protein LOC100262709 - 4e-6 At5g10020 leucine-rich repeat transmembrane protein kinase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.9 98.6 GSM147716 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 45
5.6 98.4 GSM147715 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 44
5.3 98.2 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
5.0 98.0 GSM147734 Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation 63
4.4 97.3 GSM147733 Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation 62
3.9 96.6 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
3.8 96.4 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
3.7 96.2 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
3.7 96.2 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
3.6 96.0 GSM147709 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation 38
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-2 36 1614827_at CD801620 - - 9e-1 At3g58410 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.04 4e-1 32 1622204_at CD010127 - - 5e-3 At5g48550 F-box family protein-related C.G. S.X.
0.04 4e-1 32 1609599_at CD010127 - - 5e-3 At5g48550 F-box family protein-related C.G. S.X.
0.04 4e-1 32 1608753_at CF568946 - - 1e+0 At1g50020 unknown protein C.G. S.X.
0.02 2e+0 30 1621472_at CF209680 hypothetical protein LOC100264483 - 4e-2 At4g16790 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.03 2e+0 30 1619869_at CF513928 hypothetical protein LOC100263034 - 3e-1 At4g20970 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.02 2e+0 30 1618553_at CF209161 similar to protein kinase family protein - 1e-2 At2g32850 protein kinase family protein C.G. S.X.
0.03 2e+0 30 1618396_at CF373590 hypothetical protein LOC100261671 - 1e-7 At3g27030 unknown protein C.G. S.X.
0.04 2e+0 30 1618298_at CB347158 hypothetical protein LOC100242042 - 9e-11 At1g09645 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e+0 32 Arabidopsis thaliana At4g21090 827856 adrenodoxin-like ferredoxin 1 F:electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding;P:unknown;C:mitochondrion;OBMFP - - - C.G. S.X.
0.06 2e+0 32 Glycine max HgAffx.14107.1.S1_at CB373826 - - 6e-2 At1g35340 ATP-dependent protease La (LON) domain-containing protein C.G. S.X.
0.05 7e-1 32 Hordeum vulgare HVSMEl0012A13f_at HVSMEl0012A13f - - 2e-1 At3g60490 AP2 domain-containing transcription factor TINY, putative C.G. S.X.
0.04 7e-1 34 Oryza sativa Os01g0191100 CR282531 - 60S acidic ribosomal protein P2A (P2) 3e-8 At3g44590 60S acidic ribosomal protein P2 (RPP2D) C.G. S.X.
0.06 5e-1 34 Populus trichocarpa PtpAffx.222777.1.S1_at pmrna40421 hypothetical protein - 2e-1 At5g11950 protein homodimerization C.G. S.X.
0.05 2e+0 32 Triticum aestivum TaAffx.81250.1.S1_at CA688072 - - 4e+0 At3g16360 AHP4 (HPT PHOSPHOTRANSMITTER 4) C.G. S.X.
0.05 6e-1 32 Zea mays ZmAffx.409.1.A1_at AI676839 - - 3e+0 At1g60470 AtGolS4 (Arabidopsis thaliana galactinol synthase 4) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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