Gene omics information

Query gene ID	1618133_at
Gene name	hypothetical protein LOC100259114
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1618133_at	CF404967	hypothetical protein LOC100259114	-	2e-1	At5g28610	-	S.X.	H.G.	Please select
0.67	87.9	1608904_at	CK138119.1	similar to F2D10.18	-	6e-9	At1g20696	HMGB3 (HIGH MOBILITY GROUP B 3)	S.X.	H.G.	Please select
0.59	80.6	1612905_s_at	CB345326	hypothetical protein LOC100258381	-	5e-3	At1g12830	unknown protein	S.X.	H.G.	Please select
0.53	75.2	1609633_s_at	CB971333	hypothetical protein LOC100254082	-	3e-1	At4g15735	SCRL10 (SCR-Like 10)	S.X.	H.G.	Please select
0.50	72.7	1607743_at	CF513620	hypothetical protein LOC100252303	-	5e-12	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	S.X.	H.G.	Please select
0.35	48.5	1615027_s_at	CB977478	hypothetical protein LOC100246785	-	1e-15	At2g32080	PUR ALPHA-1	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.0	94.2	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.0	94.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.0	94.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.8	93.4	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.8	93.4	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.7	93.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.7	93.0	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.6	92.5	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.5	91.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	8e-5	46	1608876_at	CA817147	hypothetical protein LOC100261976	-	2e-9	At1g47970	unknown protein	C.G.	S.X.	Please select
0.03	2e-2	38	1620687_at	CF516986	hypothetical protein LOC100256294	-	1e-7	At5g03660	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	36	1616293_at	CF212351	hypothetical protein LOC100256817	-	1e-3	At3g44750	HDA3 (HISTONE DEACETYLASE 3)	C.G.	S.X.	Please select
0.02	3e-1	34	1622589_s_at	CF517250	hypothetical protein LOC100261125	-	7e-3	At5g19590	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	34	1618922_at	CF517250	-	-	7e-3	At5g19590	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	34	1615562_at	CD007201	hypothetical protein LOC100250699	-	2e-7	At4g32720	AtLa1 (Arabidopsis thaliana La protein 1)	C.G.	S.X.	Please select
0.02	1e+0	32	1615429_at	CB916668	similar to GTP-binding family protein	-	2e+0	At1g09360	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.01	1e+0	32	1614040_at	CB975834	similar to RNA polymerase beta subunit	-	0	Atcg00170	-	C.G.	S.X.	Please select
0.03	1e+0	32	1611405_at	CF405610	-	-	1e+0	At3g49760	AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	2e-1	36	Arabidopsis thaliana	At5g28610	832960	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	9e-2	38	Glycine max	Gma.4746.1.A1_s_at	CD404836	-	-	3e+0	At4g31270	transcription factor	C.G.	S.X.	Please select
0.03	5e-1	34	Hordeum vulgare	Contig25313_at	Contig25313	-	-	1e+0	At1g74440	unknown protein	C.G.	S.X.	Please select
0.03	2e-3	44	Oryza sativa	Os01g0859300	AK070998.1	-	ABA response element binding factor	2e-7	At2g36270	ABI5 (ABA INSENSITIVE 5)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e-2	40	Populus trichocarpa	PtpAffx.210832.1.S1_at	pmrna21272	hypothetical protein	-	1e-2	At1g12830	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-2	40	Triticum aestivum	TaAffx.117214.2.S1_s_at	CA734102	-	-	4e+0	At4g29670	thioredoxin family protein	C.G.	S.X.	Please select
0.04	7e-3	40	Zea mays	ZmAffx.783.1.S1_at	AI745854	-	-	8e-7	At1g51730	RWD domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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