Gene omics information

Query gene ID 1618031_s_at
Gene name hypothetical protein LOC100243967
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.91618031_s_atCF404451hypothetical protein LOC100243967-2e-12At1g79040PSBR (photosystem II subunit R)S.X.H.G.
0.7792.31616847_s_atCA816751hypothetical protein LOC100267942-2e-12At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.6787.91613936_x_atCF568996--8e-24At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
0.6787.91611247_s_atCF206748.1similar to cytochrome f-2e+0At1g65490unknown proteinS.X.H.G.
0.3548.51610039_s_atCA817529similar to NADH-plastoquinone oxidoreductase subunit K-0Atcg00480-S.X.H.G.
0.2530.51622302_s_atCF207602hypothetical protein LOC100245459-2e-19At5g66570PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.096.7GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
3.796.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
2.993.8GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
2.993.8GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
2.893.4GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
2.893.4GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
2.893.4GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
2.893.4GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19
2.793.0GSM299460D_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.793.0GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.582e-1384901618238_atCB339270--2e-1At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.464e-692601615543_atCB341248--2e+1At5g51610ribosomal protein L11 family proteinC.G.S.X.
0.321e-321391617726_atCB345886--8e-1At5g17080cathepsin-relatedC.G.S.X.
0.182e-271211616230_x_atCF202354.1--2e+1At5g43510-C.G.S.X.
0.214e-261171614377_atCB344123--9e-1At4g12900gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinC.G.S.X.
0.161e-221051618907_x_atCF202612.1--4e+0At5g17470calmodulin-related protein, putativeC.G.S.X.
0.024e-1341612814_atCD721331--9e-2At1g35660unknown proteinC.G.S.X.
0.024e-1341609048_atCD721331--9e-2At1g35660unknown proteinC.G.S.X.
0.032e+0321622397_atCF515693--7e-2At2g39970peroxisomal membrane protein (PMP36)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.242e-1273Arabidopsis thalianaAt1g79040844245PSBR (photosystem II subunit R)Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.---C.G.S.X.
0.126e-756Glycine maxGma.15220.1.S1_s_atCD398333Ubiquitin-conjugation enzyme gene-4e-12At4g21560VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)C.G.S.X.
0.092e-446Hordeum vulgarerbaal9h21_s_atrbaal9h21--5e-5At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.188e-756Oryza sativaOs08g0200300U86018.1-Photosystem II 10 kDa polypeptide, chloroplastprecursor2e-5At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.331e-23111Populus trichocarpaPtp.1134.1.S1_x_atCV280712hypothetical protein-6e-10At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.056e-342Triticum aestivumTa.12849.1.S1_atCD490720--6e-12At1g79040PSBR (photosystem II subunit R)C.G.S.X.
0.141e-1169Zea maysZm.14810.1.S1_a_atBG841058photosystem II 10 kDa polypeptide-2e-9At1g79040PSBR (photosystem II subunit R)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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