CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618020_x_at

Gene name hypothetical protein LOC100267942

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 81.9 1618020_x_at CB972570 hypothetical protein LOC100267942 - 8e-4 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) S.X. H.G.
0.80 93.6 1608138_s_at CB342671 - - 0 Atcg00120 - S.X. H.G.
0.67 87.9 1616688_s_at CB342776 - - 0 Atcg01050 - S.X. H.G.
0.67 87.9 1610039_s_at CA817529 similar to NADH-plastoquinone oxidoreductase subunit K - 0 Atcg00480 - S.X. H.G.
0.60 81.9 1613581_at CB981734 hypothetical protein LOC100262899 - 1e-17 At3g17800 - S.X. H.G.
0.32 43.1 1614231_s_at CB970079 hypothetical protein LOC100245250 - 3e-5 At3g15360 TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.6 92.5 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
2.5 91.9 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
2.5 91.9 GSM147723 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 52
2.5 91.9 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
2.4 91.3 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
2.4 91.3 GSM147711 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 40
2.3 90.7 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
2.3 90.7 GSM147741 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 70
2.3 90.7 GSM147736 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 65
2.3 90.7 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.57 3e-56 216 1619608_at CF202280.1 - - 2e-19 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.57 3e-56 216 1612848_x_at CF202280.1 - - 2e-19 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.23 3e-56 216 1610124_at CA816957 hypothetical protein LOC100267942 - 7e-12 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.39 2e-54 210 1617102_at CF202285.1 - - 2e-12 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.56 4e-52 202 1609380_x_at CF203033.1 - - 8e-10 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.19 7e-51 198 1616847_s_at CA816751 hypothetical protein LOC100267942 - 2e-12 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.17 3e-50 196 1613936_x_at CF568996 - - 8e-24 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.59 1e-40 165 1620380_x_at CF203025.1 - - 1e-1 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.55 3e-28 123 1621341_at CA814621 - - 2e+0 At5g42020 BIP2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 8e-4 44 Arabidopsis thaliana At5g38410 833828 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) F:ribulose-bisphosphate carboxylase activity;P:response to blue light, carbon utilization by fixation of carbon dioxide, response to red light, response to far red light;C:in 8 components;POB - - - C.G. S.X.
0.04 2e+1 30 Glycine max HgAffx.8555.1.S1_at CB379947 - - 3e+0 At3g43250 cell cycle control protein-related C.G. S.X.
0.03 2e+0 32 Hordeum vulgare Contig24228_at Contig24228 - - 4e+0 At2g01260 unknown protein C.G. S.X.
0.03 6e+0 32 Oryza sativa Os07g0485600 AK059106.1 - Conserved hypothetical protein 6e+0 At3g04320 endopeptidase inhibitor C.G. S.X.
0.06 1e-3 44 Populus trichocarpa PtpAffx.224982.1.S1_a_at pmrna43943 hypothetical protein - 8e-6 At5g38410 ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) C.G. S.X.
0.04 3e+0 32 Triticum aestivum TaAffx.109027.1.S1_x_at CA681071 - - 9e+0 At4g35660 unknown protein C.G. S.X.
0.05 5e+0 30 Zea mays Zm.8881.1.S1_at BM056113 Hypothetical protein LOC100192858 - 2e+0 At3g25545 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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