CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1618018_at

Gene name hypothetical protein LOC100257171

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 93.6 1618018_at CF403362 hypothetical protein LOC100257171 - 4e+0 At4g21570 unknown protein S.X. H.G.
0.67 87.9 1614059_at CF568794 - - 5e-18 At4g21960 PRXR1 S.X. H.G.
0.40 57.7 1617993_at CF204118.1 - - 1e-19 At2g20860 LIP1 (LIPOIC ACID SYNTHASE 1) S.X. H.G.
0.31 41.3 1621507_s_at AY256862.1 GAI1 - 6e-5 At3g03450 RGL2 (RGA-LIKE 2) S.X. H.G.
0.18 19.4 1622416_at CF518913 hypothetical protein LOC100261985 - 9e-2 At5g01870 lipid transfer protein, putative S.X. H.G.
0.05 6.0 1619601_at CF972321.1 hypothetical protein LOC100248187 - 2e-24 At3g10330 transcription initiation factor IIB-2 / general transcription factor TFIIB-2 (TFIIB2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.6 98.4 GSM436411 V. riparia (VR, PI588259) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.3 97.2 GSM436401 V. riparia (VR, PI588259) LD, 15h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.2 97.1 GSM436367 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436400 V. riparia (VR, PI588259) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.8 96.4 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436398 V. riparia (VR, PI588259) LD, 15h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.2 94.9 GSM436402 V. riparia (VR, PI588259) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 34 1615980_at CD007021 - - 1e+1 At5g06710 HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA) C.G. S.X.
0.03 3e-1 34 1613481_at CF202613.1 - - 2e-6 At1g78780 pathogenesis-related family protein C.G. S.X.
0.03 3e-1 34 1612172_at CD007021 - - 1e+1 At5g06710 HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA) C.G. S.X.
0.03 3e-1 34 1611354_at CF209315 hypothetical protein LOC100258153 - 1e-3 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.03 1e+0 32 1619533_at CD008559 - - 5e+0 At5g13020 emsy N terminus domain-containing protein / ENT domain-containing protein C.G. S.X.
0.01 1e+0 32 1619145_s_at CB969125 hypothetical protein LOC100250496 - 6e-36 At2g27050 EIL1 (ETHYLENE-INSENSITIVE3-LIKE 1) C.G. S.X.
0.03 1e+0 32 1613008_at CF415576 hypothetical protein LOC100261912 - 5e-3 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.03 1e+0 32 1608708_at CF211873 hypothetical protein LOC100255983 - 2e-9 At4g29680 type I phosphodiesterase/nucleotide pyrophosphatase family protein C.G. S.X.
0.03 1e+0 32 1607681_at CD802479 hypothetical protein LOC100257925 - 5e-28 At5g43370 APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At4g21570 828242 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;MFPO - - - C.G. S.X.
0.10 3e-14 79 Glycine max Gma.11355.1.S1_at AW350358 - - 2e-7 At3g15095 unknown protein C.G. S.X.
0.03 1e-1 36 Hordeum vulgare Contig3535_at Contig3535 - - 2e-2 At5g57290 60S acidic ribosomal protein P3 (RPP3B) C.G. S.X.
0.03 5e-4 46 Oryza sativa Os02g0244600 AK069852.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-4 At3g49390 CID10 C.G. S.X.
0.05 3e-1 36 Populus trichocarpa PtpAffx.209232.1.S1_s_at pmrna18252 hypothetical protein - 5e-1 At5g51870 AGL71 (AGAMOUS-LIKE 71) C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.6102.1.S1_at CA691405 - - 4e+0 At5g47710 C2 domain-containing protein C.G. S.X.
0.04 4e-1 34 Zea mays ZmAffx.57.1.A1_at AI665066 cupin family protein - 1e+1 At3g43083 LCR33 (Low-molecular-weight cysteine-rich 33) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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