Gene omics information

Query gene ID 1617959_s_at
Gene name hypothetical protein LOC100243044
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5779.81617959_s_atCA809016hypothetical protein LOC100243044-6e-12At3g05550hypoxia-responsive family proteinS.X.H.G.
0.3650.71618965_atCF413630hypothetical protein LOC100264439-4e+0At4g39810exonuclease/ nucleic acid bindingS.X.H.G.
0.3345.71622107_atCB009545hypothetical protein LOC100259620-2e-40At5g55560protein kinase family proteinS.X.H.G.
0.2734.01611872_atCF404465hypothetical protein LOC100266256-8e-50At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)S.X.H.G.
0.2225.61619610_atCB008850hypothetical protein LOC100262106-4e-20At5g56660ILL2S.X.H.G.
0.2022.41615923_atCA814782hypothetical protein LOC100259846-8e-8At4g25030unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.999.8GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
12.699.8GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
7.599.2GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.898.6GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.798.5GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.797.7GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
4.196.9GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
4.196.9GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.896.4GSM436425V. riparia (VR, PI588259) SD, 13h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7606541614344_atCF204963.1--1e-9At3g05550hypoxia-responsive family proteinC.G.S.X.
0.032e-2381609665_a_atCB005515hypothetical protein LOC100251160-1e-10At5g27930protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
0.034e-1341622637_atCF211985hypothetical protein LOC100261454-1e-3At5g19090heavy-metal-associated domain-containing proteinC.G.S.X.
0.024e-1341610064_atCB341653similar to DNA-binding protein-3e-19At2g38470WRKY33C.G.S.X.
0.032e+0321621595_atCD003807hypothetical protein LOC100261592-1e+0At5g01790unknown proteinC.G.S.X.
0.012e+0321619909_atCF215233S-adenosylmethionine synthetase 3-1e-159At2g36880MAT3 (methionine adenosyltransferase 3)C.G.S.X.
0.022e+0321618829_atCD801308hypothetical protein LOC100245056-2e+0At3g17770dihydroxyacetone kinase family proteinC.G.S.X.
0.026e+0301622855_atCB970053hypothetical protein LOC100245536-4e-42At1g27450APT1 (ADENINE PHOSPHORIBOSYL TRANSFERASE 1)C.G.S.X.
0.026e+0301622459_atCF519169--2e-3At2g46170reticulon family protein (RTNLB5)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.236e-1271Arabidopsis thalianaAt3g05550819721hypoxia-responsive family proteinF:molecular_function unknown;P:response to hypoxia;C:cellular_component unknown;PF---C.G.S.X.
0.182e-21103Glycine maxGma.2232.1.S1_a_atAW348125--6e-6At5g27760hypoxia-responsive family proteinC.G.S.X.
0.072e-446Hordeum vulgareContig3253_s_atContig3253--2e-3At3g05550hypoxia-responsive family proteinC.G.S.X.
0.127e-1065Oryza sativaOs07g0673900AK120859.1-Hypoxia induced protein conserved region familyprotein1e-13At3g05550hypoxia-responsive family proteinC.G.S.X.
0.136e-1995Populus trichocarpaPtpAffx.24564.2.A1_a_atCV272077hypothetical protein-7e-6At5g27760hypoxia-responsive family proteinC.G.S.X.
0.111e-654Triticum aestivumTa.14360.1.S1_a_atCD904530--2e-6At3g05550hypoxia-responsive family proteinC.G.S.X.
0.092e-1065Zea maysZm.2584.1.A1_atCF627035hypothetical protein LOC100194124-1e-13At3g05550hypoxia-responsive family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage