CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617917_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.44 64.1 1617917_at CF405637 - - 4e+0 At1g53100 acetylglucosaminyltransferase S.X. H.G.
0.44 64.1 1608135_at CF206119.1 - - 1e+0 At2g47650 UXS4 (UDP-XYLOSE SYNTHASE 4) S.X. H.G.
0.43 61.5 1614538_at AY427198.1 - - 2e-1 At3g46760 protein kinase family protein S.X. H.G.
0.25 30.5 1618712_at CB003306 - - 3e-1 At4g21330 DYT1 (DYSFUNCTIONAL TAPETUM 1) S.X. H.G.
0.20 22.4 1615204_at CF371804 - - 1e+0 At3g21580 cobalt ion transmembrane transporter S.X. H.G.
0.05 6.0 1609630_at CB002524 - - 4e-14 At3g14205 phosphoinositide phosphatase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.1 98.1 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.9 97.9 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
4.3 97.2 GSM147710 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation 39
3.5 95.7 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
3.0 94.2 GSM147727 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 56
3.0 94.2 GSM147729 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 58
3.0 94.2 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
3.0 94.2 GSM436369 Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM322367 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1 GSE12842 Gene expression in grapevine in response to Bois noir infection
2.7 93.0 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.52 2e-159 559 1615068_at CF513427 hypothetical protein LOC100266680 - 3e-27 At5g02030 RPL (REPLUMLESS) C.G. S.X.
0.05 5e-6 50 1615056_at BQ792624 hypothetical protein LOC100258670 - 3e-16 At5g05520 outer membrane OMP85 family protein C.G. S.X.
0.03 7e-2 36 1621678_at CD712859 - - 3e-1 At2g04430 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) C.G. S.X.
0.03 7e-2 36 1609635_s_at CD712859 hypothetical protein LOC100257937 - 3e-1 At2g04430 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) C.G. S.X.
0.03 7e-2 36 1609403_at CF205431.1 hypothetical protein LOC100257937 - 7e-6 At5g47650 ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2) C.G. S.X.
0.03 1e+0 32 1619219_at CB968849 hypothetical protein LOC100249144 - 4e-34 At5g57360 ZTL (ZEITLUPE) C.G. S.X.
0.03 1e+0 32 1617991_at CF513072 - - 1e+0 At5g17870 PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6) C.G. S.X.
0.02 5e+0 30 1621184_at CD009048 - - 3e+1 At3g02555 unknown protein C.G. S.X.
0.02 5e+0 30 1620632_s_at CB968921 hypothetical protein LOC100249439 - 2e+0 At4g16430 basic helix-loop-helix (bHLH) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At1g53100 841744 acetylglucosaminyltransferase F:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO - - - C.G. S.X.
0.04 6e+0 32 Glycine max GmaAffx.82263.1.S1_s_at AW568454 - - 9e-1 At5g63600 FLS5 (FLAVONOL SYNTHASE 5) C.G. S.X.
0.04 2e+0 32 Hordeum vulgare Contig25741_at Contig25741 - - 8e-1 At2g24400 auxin-responsive protein, putative / small auxin up RNA (SAUR_D) C.G. S.X.
0.03 8e+0 32 Oryza sativa Os10g0365900 9638.m01861 - - 6e+0 At3g20070 TTN9 (TITAN9) C.G. S.X.
0.04 2e-2 40 Populus trichocarpa PtpAffx.209317.1.S1_x_at pmrna18410 hypothetical protein - 3e-14 At5g02030 RPL (REPLUMLESS) C.G. S.X.
0.04 4e+0 32 Triticum aestivum TaAffx.22520.1.A1_at CD453640 - - 9e+0 At5g55990 CBL2 (CALCINEURIN B-LIKE 2) C.G. S.X.
0.04 7e-3 40 Zea mays Zm.9681.1.A1_at BM339116 - - 5e+0 At4g29735 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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