CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617845_at

Gene name hypothetical protein LOC100263968

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.48 68.8 1617845_at CD800649 hypothetical protein LOC100263968 - 4e-35 At2g38630 - S.X. H.G.
0.70 88.6 1614710_at CF404864 - - 1e-1 At1g53625 unknown protein S.X. H.G.
0.67 87.9 1615901_at CF405787 hypothetical protein LOC100248277 - 5e+0 At4g13075 RALFL30 (RALF-LIKE 30) S.X. H.G.
0.63 84.3 1613129_at CB970410 hypothetical protein LOC100266068 - 2e-13 At4g17330 ATG2484-1 S.X. H.G.
0.57 79.8 1611483_at CF207449 hypothetical protein LOC100253154 - 7e+0 Atmg00320 - S.X. H.G.
0.52 73.9 1607726_at CB349094 hypothetical protein LOC100262331 - 8e-25 At4g34100 protein binding / zinc ion binding S.X. H.G.
0.50 72.7 1615281_at CD800042 hypothetical protein LOC100241659 - 2e-17 At3g26560 ATP-dependent RNA helicase, putative S.X. H.G.
0.50 72.7 1608089_at BQ796412 hypothetical protein LOC100242497 - 8e-9 At3g63080 ATGPX5 (glutathione peroxidase 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.5 91.9 GSM436409 V. riparia (VR, PI588259) SD, 13h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.5 91.9 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436398 V. riparia (VR, PI588259) LD, 15h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436384 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.2 89.9 GSM436361 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436407 V. riparia (VR, PI588259) LD, 15h 42 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.0 88.2 GSM436397 V. riparia (VR, PI588259) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 34 1614232_at CF214793 hypothetical protein LOC100259727 - 7e-11 At4g00026 - C.G. S.X.
0.01 2e+0 32 1622738_at CB342472 hypothetical protein LOC100243793 - 2e-28 At3g52300 ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL) C.G. S.X.
0.02 2e+0 32 1622337_at BQ800430 - - 4e+0 At5g43720 unknown protein C.G. S.X.
0.02 2e+0 32 1619510_s_at BQ800430 hypothetical protein LOC100252419 - 4e+0 At5g43720 unknown protein C.G. S.X.
0.02 2e+0 32 1614407_at CF403465 - - 6e-2 At1g22750 unknown protein C.G. S.X.
0.02 2e+0 32 1614096_at CF511095 hypothetical protein LOC100261881 - 1e-19 At3g07890 RabGAP/TBC domain-containing protein C.G. S.X.
0.02 2e+0 32 1611870_at CF414975 hypothetical protein LOC100247177 - 8e-152 At5g09740 HAM2 (histone acetyltransferase of the MYST family 2) C.G. S.X.
0.02 8e+0 30 1621914_s_at CF216047 hypothetical protein LOC100249014 - 2e-5 At5g50740 metal ion binding C.G. S.X.
0.01 8e+0 30 1621659_at BQ798789 hypothetical protein LOC100253534 - 5e-52 At1g55500 ECT4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 4e-35 149 Arabidopsis thaliana At2g38630 818445 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO - - - C.G. S.X.
0.22 3e-30 133 Glycine max GmaAffx.42903.1.S1_at CA801699 - - 8e-29 At2g38630 - C.G. S.X.
0.06 2e-11 69 Hordeum vulgare Contig3161_at Contig3161 - - 3e-19 At3g54190 - C.G. S.X.
0.17 2e-35 151 Oryza sativa Os05g0482600 AK120343.1 - WD40-like domain containing protein 3e-28 At3g54190 - C.G. S.X.
0.25 7e-87 321 Populus trichocarpa PtpAffx.211268.1.S1_at pmrna22106 hypothetical protein - 5e-66 At3g54190 - C.G. S.X.
0.13 2e-6 54 Triticum aestivum Ta.8243.1.S1_at CA712578 - - 4e-5 At2g38630 - C.G. S.X.
0.12 9e-13 73 Zea mays Zm.2790.1.A1_at AW067260 hypothetical protein LOC100274410 - 1e-6 At3g54190 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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