CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617781_at

Gene name hypothetical protein LOC100246420

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.84 94.8 1617781_at CF518541 hypothetical protein LOC100246420 - 4e-3 At1g76185 unknown protein S.X. H.G.
0.79 92.7 1608191_at CD798831 hypothetical protein LOC100245911 - 4e-20 At2g39700 ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) S.X. H.G.
0.75 91.3 1606471_at CF372161 hypothetical protein LOC100244589 - 3e-6 At5g07030 aspartic-type endopeptidase S.X. H.G.
0.64 84.7 1616524_at CF513451 hypothetical protein LOC100260283 - 5e-3 At1g71691 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.64 84.7 1622481_x_at CF568921 - - 3e-2 At5g10430 AGP4 (ARABINOGALACTAN PROTEIN 4) S.X. H.G.
0.62 83.3 1611378_at CF606069 hypothetical protein LOC100244478 - 2e-8 At1g60630 leucine-rich repeat family protein S.X. H.G.
0.61 83.2 1617440_at CF373136 hypothetical protein LOC100247017 - 8e-2 At5g61470 zinc finger (C2H2 type) family protein S.X. H.G.
0.61 83.2 1619772_at CF205273.1 hypothetical protein LOC100260458 - 2e+0 At3g05070 - S.X. H.G.
0.57 79.8 1618871_at CF510551 hypothetical protein LOC100265907 - 3e-7 At4g38660 thaumatin, putative S.X. H.G.
0.56 79.4 1610683_at CF214265 hypothetical protein LOC100264093 - 2e-6 At5g67260 CYCD3 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.8 99.8 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
7.9 99.3 GSM436413 V. riparia (VR, PI588259) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
7.6 99.3 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
7.5 99.2 GSM436396 V. riparia (VR, PI588259) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
7.4 99.2 GSM436414 V. riparia (VR, PI588259) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
5.5 98.4 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
4.8 97.8 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.7 97.7 GSM436379 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.7 97.7 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436380 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-2 36 1618847_s_at CF207150 hypothetical protein LOC100244868 - 7e-47 At3g63490 ribosomal protein L1 family protein C.G. S.X.
0.03 3e-1 34 1622162_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
0.03 3e-1 34 1621826_at CB975558 hypothetical protein LOC100265013 - 2e+0 At2g35765 unknown protein C.G. S.X.
0.03 3e-1 34 1621568_at CF415414 hypothetical protein LOC100252433 - 1e+0 At2g07721 unknown protein C.G. S.X.
0.02 3e-1 34 1621270_at CB971990 hypothetical protein LOC100252531 - 4e-4 At5g11590 TINY2 (TINY2) C.G. S.X.
0.02 3e-1 34 1620275_x_at CF204388.1 - - 1e-4 At5g66400 RAB18 (RESPONSIVE TO ABA 18) C.G. S.X.
0.03 3e-1 34 1618383_at CD718954 - - 1e+0 At3g02390 unknown protein C.G. S.X.
0.02 3e-1 34 1617303_at CF204388.1 - - 1e-4 At5g66400 RAB18 (RESPONSIVE TO ABA 18) C.G. S.X.
0.03 3e-1 34 1615256_at CD714032 - - 3e-1 At1g57565 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 4e-3 42 Arabidopsis thaliana At1g76185 843951 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.06 6e-3 42 Glycine max GmaAffx.45739.1.S1_at BI469739 - - 2e-7 At5g13090 unknown protein C.G. S.X.
0.03 3e-2 38 Hordeum vulgare Contig5767_at Contig5767 - - 1e-11 At5g10780 - C.G. S.X.
0.04 5e-1 36 Oryza sativa Os05g0354700 9633.m02621 - - 5e-1 At5g66800 unknown protein C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.24949.1.A1_at CV240287 hypothetical protein - 2e-12 At5g59790 unknown protein C.G. S.X.
0.03 7e-2 38 Triticum aestivum TaAffx.85913.1.S1_at CA618462 - - 1e+0 At1g08880 H2AXA C.G. S.X.
0.03 3e-2 38 Zea mays Zm.4862.1.S1_a_at CF629721 hypothetical protein LOC100273666 - 2e-27 At4g27230 HTA2 (histone H2A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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