Gene omics information

Query gene ID	1617751_s_at
Gene name	hypothetical protein LOC100243312
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	81.9	1617751_s_at	CA813831	hypothetical protein LOC100243312	-	8e-1	At2g22980	serine-type carboxypeptidase	S.X.	H.G.	Please select
0.55	77.3	1610428_at	CD012983	hypothetical protein LOC100263040	-	2e-4	At1g32090	early-responsive to dehydration protein-related / ERD protein-related	S.X.	H.G.	Please select
0.53	75.2	1616147_at	CF404954	hypothetical protein LOC100243192	-	2e-6	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	S.X.	H.G.	Please select
0.52	73.9	1606482_at	BQ796112	hypothetical protein LOC100243077	-	3e-10	At3g44830	lecithin:cholesterol acyltransferase family protein / LACT family protein	S.X.	H.G.	Please select
0.51	73.2	1614047_s_at	CF512458	hypothetical protein LOC100268134	-	1e-1	At1g31300	-	S.X.	H.G.	Please select
0.48	68.8	1607967_at	CB009400	hypothetical protein LOC100261140	-	4e-1	At3g24860	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select
0.44	64.1	1618576_at	BQ800615	pectate lyase PL1-like	-	4e-124	At4g13710	pectate lyase family protein	S.X.	H.G.	Please select
0.44	64.1	1615374_at	CB911656	hypothetical protein LOC100241955	-	8e-1	At1g34000	OHP2 (ONE-HELIX PROTEIN 2)	S.X.	H.G.	Please select
0.43	61.5	1620050_at	CB009432	hypothetical protein LOC100244027	-	1e-5	At5g17500	glycosyl hydrolase family 5 protein / cellulase family protein	S.X.	H.G.	Please select
0.42	60.1	1615257_at	CB972713	hexose transporter-like	-	6e-12	At4g35300	TMT2 (TONOPLAST MONOSACCHARIDE TRANSPORTER2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.9	99.8	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
11.2	99.7	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
11.0	99.7	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.5	99.6	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
9.4	99.6	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.3	99.4	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.2	99.4	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.1	99.4	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
7.9	99.3	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
6.9	99.1	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.77	0	710	1609389_at	CF201456.1	-	-	1e+0	At1g03680	ATHM1	C.G.	S.X.	Please select
0.05	2e-4	44	1622344_at	CD715623	hypothetical protein LOC100241684	-	1e+0	At2g03620	magnesium transporter CorA-like family protein (MRS2-5)	C.G.	S.X.	Please select
0.05	2e-4	44	1609714_at	CD715623	-	-	1e+0	At2g03620	magnesium transporter CorA-like family protein (MRS2-5)	C.G.	S.X.	Please select
0.02	9e-1	32	1622630_s_at	CF209498	hypothetical protein LOC100253858	-	1e-29	At2g41250	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select
0.04	9e-1	32	1612054_at	CF213303	hypothetical protein LOC100248963	-	3e-25	At1g19650	SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative	C.G.	S.X.	Please select
0.03	4e+0	30	1622327_at	CF206369.1	-	-	7e-6	At1g07240	UGT71C5 (UDP-GLUCOSYL TRANSFERASE 71C5)	C.G.	S.X.	Please select
0.01	4e+0	30	1620850_at	CB343297	hypothetical protein LOC100241461	-	2e-140	At3g56940	CRD1 (COPPER RESPONSE DEFECT 1)	C.G.	S.X.	Please select
0.02	4e+0	30	1619954_at	CB974333	hypothetical protein LOC100257028	-	7e-16	At5g07830	AtGUS2 (Arabidopsis thaliana glucuronidase 2)	C.G.	S.X.	Please select
0.02	4e+0	30	1617754_at	CB973158	hypothetical protein LOC100267616	-	3e-17	At5g65640	bHLH093 (beta HLH protein 93)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	34	Arabidopsis thaliana	At2g22980	816829	serine-type carboxypeptidase	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	1e-12	73	Glycine max	GmaAffx.45573.1.A1_at	AW201213	-	-	7e-2	At3g46560	TIM9	C.G.	S.X.	Please select
0.03	2e+0	32	Hordeum vulgare	Contig21755_at	Contig21755	-	-	7e-2	At2g40320	unknown protein	C.G.	S.X.	Please select
0.03	6e+0	32	Oryza sativa	Os12g0228700	BX900947	-	Beta-glucosidase aggregating factor	7e-2	At5g07380	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	1e-6	54	Populus trichocarpa	PtpAffx.4597.3.A1_at	DN491687	hypothetical protein	-	4e+0	At5g28919	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e+0	32	Triticum aestivum	Ta.24322.1.A1_at	BU808663	-	-	2e+1	At5g20290	40S ribosomal protein S8 (RPS8A)	C.G.	S.X.	Please select
0.03	5e+0	30	Zea mays	Zm.3712.1.S1_at	AW506785	Hypothetical protein LOC100216583	-	6e-2	At1g69430	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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