Gene omics information

Query gene ID	1617655_at
Gene name	hypothetical protein LOC100262391
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1617655_at	CB348593	hypothetical protein LOC100262391	-	5e-10	At3g16620	ATTOC120	S.X.	H.G.	Please select
0.60	81.9	1622765_at	CF405914	-	-	4e+0	At3g59450	calcium-binding EF hand family protein	S.X.	H.G.	Please select
0.57	79.8	1616867_at	CF405655	hypothetical protein LOC100254223	-	2e-17	At3g01090	AKIN10 (Arabidopsis SNF1 kinase homolog 10)	S.X.	H.G.	Please select
0.50	72.7	1620968_at	CF513304	hypothetical protein LOC100262977	-	5e+0	Atmg00640	-	S.X.	H.G.	Please select
0.43	61.5	1614667_at	CB976778	hypothetical protein LOC100243706	-	4e-6	At2g44200	unknown protein	S.X.	H.G.	Please select
0.40	57.7	1608653_at	CB975644	hypothetical protein LOC100263217	-	5e+0	At4g15020	DNA binding / protein dimerization	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.9	93.8	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436427	V. riparia (VR, PI588259) SD, 13h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436361	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436386	Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436398	V. riparia (VR, PI588259) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436355	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	36	1615013_at	CB341279	-	-	3e-10	At4g28706	pfkB-type carbohydrate kinase family protein	C.G.	S.X.	Please select
0.02	6e-1	34	1609887_at	CF205557.1	-	-	1e-19	At5g53160	unknown protein	C.G.	S.X.	Please select
0.01	6e-1	34	1607974_at	CF213553	hypothetical protein LOC100266932	-	1e-30	At3g62870	60S ribosomal protein L7A (RPL7aB)	C.G.	S.X.	Please select
0.02	2e+0	32	1619364_at	CF208485	-	-	2e-2	At1g67400	-	C.G.	S.X.	Please select
0.02	2e+0	32	1614669_at	CF513785	-	-	1e+0	At2g15390	FUT4	C.G.	S.X.	Please select
0.02	2e+0	32	1609997_at	CB001509	hypothetical protein LOC100242049	-	1e+0	At1g56240	AtPP2-B13 (Phloem protein 2-B13)	C.G.	S.X.	Please select
0.02	9e+0	30	1621679_at	CB003331	similar to Os11g0657300	-	4e-22	At2g14285	-	C.G.	S.X.	Please select
0.02	9e+0	30	1620719_at	CD011034	-	-	3e-1	At4g19840	ATPP2-A1	C.G.	S.X.	Please select
0.02	9e+0	30	1620486_at	CF207301	hypothetical protein LOC100246026	-	4e+0	At2g35345	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	5e-10	65	Arabidopsis thaliana	At3g16620	820913	ATTOC120	component of TOC complex, plastid protein import machinery.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.34	2e-13	77	Glycine max	Gma.7167.1.S1_at	BI968922	-	-	1e-13	At2g16640	TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132)	C.G.	S.X.	Please select
0.03	2e-1	36	Hordeum vulgare	Contig18777_at	Contig18777	-	-	5e-1	At3g45275	-	C.G.	S.X.	Please select
0.04	4e-6	54	Oryza sativa	Os10g0548800	AK072270.1	-	Chloroplast outer envelope protein-like(Chloroplast outer envelope membrane-associated proteinToc120)	2e-18	At3g16620	ATTOC120	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.46	6e-60	232	Populus trichocarpa	Ptp.6968.1.A1_at	CV233808	hypothetical protein	-	2e-12	At3g16620	ATTOC120	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.02	8e+0	32	Triticum aestivum	Ta.21841.1.S1_at	CA704494	-	-	3e+0	At3g02150	PTF1 (PLASTID TRANSCRIPTION FACTOR 1)	C.G.	S.X.	Please select
0.03	2e-1	36	Zea mays	Zm.9278.1.A1_at	BM348240	-	-	1e+0	At3g22530	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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