Gene omics information

Query gene ID 1617646_at
Gene name hypothetical protein LOC100261565
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5980.61617646_atCB340164hypothetical protein LOC100261565-4e-26At5g16400ATF2S.X.H.G.
0.9198.81620744_atCF403966hypothetical protein LOC100248911-2e-6At1g20340DRT112S.X.H.G.
0.5577.31611733_s_atBQ797982hypothetical protein LOC100240928-2e-12At1g03130PSAD-2 (photosystem I subunit D-2)S.X.H.G.
0.5072.71618370_atCF510718hypothetical protein LOC100242802-8e-31At4g12800PSAL (photosystem I subunit L)S.X.H.G.
0.4666.51619903_atCD720479hypothetical protein LOC100263275-8e-71At3g54890LHCA1S.X.H.G.
0.4057.71614598_atCF373065hypothetical protein LOC100266604-2e-4At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.597.5GSM147674Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation3
4.397.2GSM147680Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation9
3.796.2GSM147698Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation27
3.796.2GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15
3.495.5GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34
3.495.5GSM147703Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation32
3.495.5GSM147679Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation8
3.294.9GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4
3.294.9GSM147685Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation14
3.294.9GSM147688Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation17
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-3401612752_atCF201925.1--3e-20At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.031e-1361621077_s_atCB975305hypothetical protein LOC100256381-2e-17At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)C.G.S.X.
0.022e+0321614905_atBQ794294hypothetical protein LOC100266945-7e-96At5g55990CBL2 (CALCINEURIN B-LIKE 2)C.G.S.X.
0.022e+0321609123_atCF215118hypothetical protein LOC100259150-2e-55At1g09630ATRAB11C (ARABIDOPSIS RAB GTPASE 11C)C.G.S.X.
0.032e+0321607628_atCF373542--3e-9At4g25700BETA-OHASE 1 (BETA-HYDROXYLASE 1)C.G.S.X.
0.028e+0301621888_atCD710781hypothetical protein LOC100252475-4e-1At5g39570unknown proteinC.G.S.X.
0.018e+0301621682_s_atCF404793pyruvate decarboxylase 1-5e-52At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.028e+0301621609_atAY348574.1class III peroxidase GvPx2b-5e-7At5g64120peroxidase, putativeC.G.S.X.
0.028e+0301620963_atCF403847hypothetical protein LOC100247592-7e-49At5g58230MSI1 (MULTICOPY SUPRESSOR OF IRA1)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.324e-26119Arabidopsis thalianaAt5g16400831501ATF2Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.---C.G.S.X.
0.284e-45182Glycine maxGma.17766.1.S1_atCD399397--1e-32At5g16400ATF2C.G.S.X.
0.063e-652Hordeum vulgareContig4022_atContig4022--5e-4At5g16400ATF2C.G.S.X.
0.256e-1789Oryza sativaOs01g0913000AF022741.1--2e-6At5g16400ATF2C.G.S.X.
0.285e-1789Populus trichocarpaPtp.6707.1.S1_s_atDN483945thioredoxin f-3e-11At5g16400ATF2C.G.S.X.
0.239e-21101Triticum aestivumTa.12945.1.S1_atCA486235--3e-11At5g16400ATF2C.G.S.X.
0.247e-29127Zea maysZm.19158.2.S1_a_atBM073998hypothetical protein LOC100273021 /// thioredoxin F-type-3e-11At5g16400ATF2C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage