Gene omics information

Query gene ID 1617609_at
Gene name hypothetical protein LOC100255514
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81617609_atCF207468hypothetical protein LOC100255514-3e-24At5g24380YSL2 (YELLOW STRIPE LIKE 2)S.X.H.G.
0.023.21617829_atCF215141hypothetical protein LOC100244817-9e-2At5g60800heavy-metal-associated domain-containing proteinS.X.H.G.
0.012.11614153_atCF207979hypothetical protein LOC100267681-6e-43At5g13110G6PD2 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2)S.X.H.G.
0.012.11621047_atCB968782--1e+0At1g71050heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedS.X.H.G.
0.012.11617180_s_atCA814162hypothetical protein LOC100247137-2e-33At3g56240CCH (COPPER CHAPERONE)S.X.H.G.
0.000.51615231_atCF607773hypothetical protein LOC100254995-1e-19At2g31680AtRABA5d (Arabidopsis Rab GTPase homolog A5d)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.199.1GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
5.998.6GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
5.098.0GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
4.997.9GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
4.797.7GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.896.4GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.896.4GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.896.4GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.796.2GSM147677Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation6
3.696.0GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.341e-14791622720_s_atBQ794584YS1-like protein-like-8e-10At4g24120YSL1 (YELLOW STRIPE LIKE 1)C.G.S.X.
0.046e-4441620492_atCA818735similar to YSL6 (YELLOW STRIPE LIKE 6); oligopeptide transporter-3e-23At3g27020YSL6 (YELLOW STRIPE LIKE 6)C.G.S.X.
0.092e-3421612288_atCB969093--3e-1At4g09040RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.026e-1341622771_atCF568860--2e-2At1g72110unknown proteinC.G.S.X.
0.026e-1341614554_atCD799849--2e-20At1g56045ribosomal protein L41 family proteinC.G.S.X.
0.026e-1341611935_atCB002521--6e+0At3g23490CYN (CYANASE)C.G.S.X.
0.026e-1341608177_atCB002521--6e+0At3g23490CYN (CYANASE)C.G.S.X.
0.022e+0321621979_atCB339366hypothetical protein LOC100254010-7e-12At1g62850-C.G.S.X.
0.022e+0321617990_s_atCB969113hypothetical protein LOC100249683-1e-16At1g48370YSL8 (YELLOW STRIPE LIKE 8)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.113e-24113Arabidopsis thalianaAt5g24380832509YSL2 (YELLOW STRIPE LIKE 2)closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1---C.G.S.X.
0.518e-124444Glycine maxGma.15578.1.S1_atCD414652--2e-15At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.041e-963Hordeum vulgareContig19081_atContig19081--2e-3At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.091e-1895Oryza sativaOs04g0542200AK120923.1-Oligopeptide transporter OPT superfamily protein6e-9At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
0.339e-53208Populus trichocarpaPtpAffx.16423.1.S1_atCV262996oligopeptide transporter OPT family-3e-10At5g53550YSL3 (YELLOW STRIPE LIKE 3)C.G.S.X.
0.038e+032Triticum aestivumTaAffx.53334.1.S1_atCA693468--6e+0At1g71130AP2 domain-containing transcription factor, putativeC.G.S.X.
0.022e-136Zea maysZm.582.1.S1_atAF186234.2yellow stripe1-3e-1At5g24380YSL2 (YELLOW STRIPE LIKE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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