Gene omics information

Query gene ID 1617607_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5577.31617607_atCB918932--3e-2At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)S.X.H.G.
0.4464.11617721_atCF568847--1e-76At5g56030HSP81-2 (HEAT SHOCK PROTEIN 81-2)S.X.H.G.
0.3853.61613291_atCF972323.1--4e-4At3g13410unknown proteinS.X.H.G.
0.3345.71606450_atCD712784--2e-12At3g20560ATPDIL5-3 (PDI-LIKE 5-3)S.X.H.G.
0.2937.71619724_atCA818237--1e-23At5g27640TIF3B1 (TRANSLATION INITIATION FACTOR 3B1)S.X.H.G.
0.1819.41621365_atCK136934.1--9e-69At5g41700UBC8 (UBIQUITIN CONJUGATING ENZYME 8)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.298.8GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
5.698.4GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM436347Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.495.5GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.495.5GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.294.9GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.993.8GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.893.4GSM436391V. riparia (VR, PI588259) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.793.0GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.00019131614622_atCB910360hypothetical protein LOC100258256-3e-2At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)C.G.S.X.
0.021e-1361616107_s_atCB340793hypothetical protein LOC100247246-5e-51At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)C.G.S.X.
0.021e-1361611808_atCF205006.1--2e-25At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)C.G.S.X.
0.026e-1341611042_atCB348049hypothetical protein LOC100244390-9e-5At3g20270lipid-binding serum glycoprotein family proteinC.G.S.X.
0.022e+0321621578_atBM437326--1e-1At2g33270ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3)C.G.S.X.
0.012e+0321617562_atCF512363hypothetical protein LOC100246010-5e-60At4g14710acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingC.G.S.X.
0.022e+0321608972_atBM437326hypothetical protein LOC100267873-1e-1At2g33270ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3)C.G.S.X.
0.029e+0301622570_atCF211647hypothetical protein LOC100242690-5e-15At5g65490-C.G.S.X.
0.029e+0301621756_atCA818430hypothetical protein LOC100260561-1e-25At1g61780postsynaptic protein-relatedC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-240Arabidopsis thalianaAt4g17090827419CT-BMY (CHLOROPLAST BETA-AMYLASE)Encodes a beta-amylase targeted to the chloroplast. Transgenic BMY8 RNAi lines fail to accumulate maltose during cold shock suggesting that maltose accumulation coincides with BMY8 expression. Apart from maltose, the sugar content of the RNAi lines were similar to wildtype (glucose and sucrose unaffected).---C.G.S.X.
0.401e-39165Glycine maxGma.6900.1.S1_atBE659171--9e-3At2g45880BAM7 (BETA-AMYLASE 7)C.G.S.X.
0.051e-654Hordeum vulgareContig10917_atContig10917--5e-2At4g17090CT-BMY (CHLOROPLAST BETA-AMYLASE)C.G.S.X.
0.054e-963Oryza sativaOs01g0236800CR280155-Glycoside hydrolase, family 14 protein3e+0At1g08120-C.G.S.X.
0.245e-859Populus trichocarpaPtpAffx.56491.1.S1_atCV263162hypothetical protein-1e-4At5g18670BMY3C.G.S.X.
0.042e-344Triticum aestivumTa.23312.1.S1_atCA745374--2e-3At3g23920BAM1 (BETA-AMYLASE 1)C.G.S.X.
0.031e+130Zea maysZmAffx.158.1.A1_atAI668130--3e-1At2g23400dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage