CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617600_at

Gene name hypothetical protein LOC100267978

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 95.1 1617600_at CF513622 hypothetical protein LOC100267978 - 2e-5 At3g26490 phototropic-responsive NPH3 family protein S.X. H.G.
0.67 87.9 1620634_at CD720882 hypothetical protein LOC100247245 - 7e-18 At1g44446 CH1 (CHLORINA 1) S.X. H.G.
0.55 77.3 1610735_at CB341620 hypothetical protein LOC100258753 - 2e-3 At1g18660 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.46 66.5 1620639_at CA817351 hypothetical protein LOC100247658 - 3e-1 At1g10455 unknown protein S.X. H.G.
0.46 66.5 1618249_at CF510539 hypothetical protein LOC100260378 - 2e-39 At2g24270 ALDH11A3 S.X. H.G.
0.33 45.7 1622682_at CB001944 hypothetical protein LOC100256501 - 2e-67 At1g16720 HCF173 (high chlorophyll fluorescence phenotype 173) S.X. H.G.
0.27 34.0 1618107_at CF403374 hypothetical protein LOC100263831 - 1e-7 At4g25650 ACD1-LIKE (ACD1-LIKE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.1 99.8 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
10.1 99.6 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
9.9 99.6 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
8.9 99.5 GSM147712 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 41
8.4 99.4 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
7.4 99.2 GSM147737 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 66
6.9 99.1 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
6.9 99.1 GSM147736 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 65
4.5 97.5 GSM147682 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 11
4.4 97.3 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 34 1607254_at CB345756 hypothetical LOC100263492 - 5e-1 At3g06070 unknown protein C.G. S.X.
0.01 1e+0 32 1606827_at CF404781 hypothetical protein LOC100264594 - 0 At1g24510 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative C.G. S.X.
0.02 6e+0 30 1622699_at CB007214 hypothetical protein LOC100247473 - 1e-4 At4g40000 NOL1/NOP2/sun family protein C.G. S.X.
0.03 6e+0 30 1622272_at CF513957 - - 1e+0 At3g17660 AGD15 (ARF-GAP domain 15) C.G. S.X.
0.03 6e+0 30 1621318_at BM438007 hypothetical protein LOC100252887 - 3e-4 At3g23310 protein kinase, putative C.G. S.X.
0.03 6e+0 30 1621108_at CF512461 hypothetical protein LOC100262034 - 3e-5 At2g39270 adenylate kinase family protein C.G. S.X.
0.02 6e+0 30 1621008_at CF204094.1 - - 4e-1 At5g20120 unknown protein C.G. S.X.
0.03 6e+0 30 1620873_at CB339891 hypothetical protein LOC100247687 - 1e-15 At2g37660 binding / catalytic/ coenzyme binding C.G. S.X.
0.02 6e+0 30 1620749_at CB341386 hypothetical protein LOC100260197 - 1e-10 At3g09700 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-5 50 Arabidopsis thaliana At3g26490 822256 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;PB - - - C.G. S.X.
0.03 2e+0 34 Glycine max HgAffx.14594.1.A1_at CB299546 - - 3e+0 At5g59360 unknown protein C.G. S.X.
0.03 9e+0 30 Hordeum vulgare HVSMEk0005E03r2_s_at HVSMEk0005E03r2 - - 4e+0 At5g65610 unknown protein C.G. S.X.
0.06 2e+0 34 Oryza sativa Os10g0350100 NM_195936.1 - - 4e-1 At3g47710 bHLH family protein C.G. S.X.
0.39 5e-50 198 Populus trichocarpa PtpAffx.96638.1.S1_at BP934156 hypothetical protein - 1e-13 At1g67900 phototropic-responsive NPH3 family protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.92456.1.A1_at BJ265162 - - 1e+0 At2g29020 Rab5-interacting family protein C.G. S.X.
0.04 5e-4 44 Zea mays Zm.5126.1.A1_at CK145113 - - 3e-2 At5g66560 phototropic-responsive NPH3 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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