Gene omics information

Query gene ID	1617532_at
Gene name	hypothetical protein LOC100256945
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	94.6	1617532_at	CF511414	hypothetical protein LOC100256945	-	3e-10	At1g02080	transcriptional regulator-related	S.X.	H.G.	Please select
0.80	93.6	1612148_at	CB976186	hypothetical protein LOC100252593	-	1e+0	At5g46780	VQ motif-containing protein	S.X.	H.G.	Please select
0.60	81.9	1611177_at	CF518669	hypothetical protein LOC100263874	-	2e-8	At1g60200	splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein	S.X.	H.G.	Please select
0.31	41.3	1611391_at	CF513307	hypothetical protein LOC100256320	-	1e-15	At1g48410	AGO1 (ARGONAUTE 1)	S.X.	H.G.	Please select
0.23	27.5	1609735_at	CF372575	hypothetical protein LOC100249713	-	1e-75	At1g50030	TOR (TARGET OF RAPAMYCIN)	S.X.	H.G.	Please select
0.23	27.5	1611458_at	CF207715	hypothetical protein LOC100243644	-	2e-18	At2g35530	bZIP transcription factor family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.0	96.7	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.1	94.6	GSM436428	V. riparia (VR, PI588259) SD, 13h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.7	93.0	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436429	V. riparia (VR, PI588259) SD, 13h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.5	91.9	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.4	91.3	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.3	90.7	GSM436408	V. riparia (VR, PI588259) LD, 15h 42 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	6e-9	59	1611218_at	CB912267	hypothetical LOC100261590	-	3e-1	At1g66360	C2 domain-containing protein	C.G.	S.X.	Please select
0.03	4e-1	34	1617688_at	CK138201.1	hypothetical protein LOC100241560	-	6e-9	At4g25650	ACD1-LIKE (ACD1-LIKE)	C.G.	S.X.	Please select
0.02	4e-1	34	1616917_at	CB001568	-	-	4e-1	At1g09240	NAS3 (NICOTIANAMINE SYNTHASE 3)	C.G.	S.X.	Please select
0.03	4e-1	34	1613870_at	CK138201.1	-	-	6e-9	At4g25650	ACD1-LIKE (ACD1-LIKE)	C.G.	S.X.	Please select
0.03	4e-1	34	1614017_s_at	CF403762	hypothetical protein LOC100241560	-	2e-2	At2g25735	unknown protein	C.G.	S.X.	Please select
0.02	4e-1	34	1613070_at	CB001568	hypothetical protein LOC100241511	-	4e-1	At1g09240	NAS3 (NICOTIANAMINE SYNTHASE 3)	C.G.	S.X.	Please select
0.02	4e-1	34	1607762_at	CF207334	hypothetical protein LOC100249697	-	6e-1	At3g44440	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	1622410_s_at	CB344360	-	-	5e-9	Atcg00050	-	C.G.	S.X.	Please select
0.02	1e+0	32	1619074_at	CB346573	-	-	3e-2	At5g12020	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-10	65	Arabidopsis thaliana	At1g02080	839244	transcriptional regulator-related	F:transcription regulator activity;P:unknown;C:membrane;MOFBP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	3e-14	79	Glycine max	GmaAffx.44143.1.S1_at	BU547730	-	-	2e-16	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select
0.03	6e-1	34	Hordeum vulgare	HVSMEa0012I10r2_s_at	HVSMEa0012I10r2	-	-	3e+0	At2g04025	unknown protein	C.G.	S.X.	Please select
0.03	8e-22	105	Oryza sativa	Os.4089.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.30	6e-34	145	Populus trichocarpa	PtpAffx.11426.1.A1_at	CV263606	hypothetical protein	-	9e-15	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	3e-4	46	Triticum aestivum	Ta.13009.1.S1_at	CA485346	-	-	5e+0	At5g43620	S-locus protein-related	C.G.	S.X.	Please select
0.09	3e-2	38	Zea mays	Zm.7360.1.A1_at	CK827608	hypothetical protein LOC100273922	-	3e-27	At1g02080	transcriptional regulator-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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