CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617441_at

Gene name hypothetical protein LOC100246691

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1617441_at CF074656 hypothetical protein LOC100246691 - 1e-13 At3g51850 CPK13 S.X. H.G.
0.50 72.7 1622676_s_at CF212246 hypothetical protein LOC100247010 - 3e-16 At1g25280 AtTLP10 (TUBBY LIKE PROTEIN 10) S.X. H.G.
0.40 57.7 1621792_at CF414727 hypothetical protein LOC100249673 - 1e-3 At1g75080 BZR1 (BRASSINAZOLE-RESISTANT 1) S.X. H.G.
0.19 20.9 1620672_at CF207554 hypothetical protein LOC100254089 - 4e-11 At3g54350 emb1967 (embryo defective 1967) S.X. H.G.
0.09 9.4 1606720_at CD800244 hypothetical protein LOC100253703 - 8e-111 At1g20090 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) S.X. H.G.
0.09 9.4 1611002_s_at CB969717 hypothetical protein LOC100246998 - 6e-13 At3g10210 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 97.1 GSM436421 V. riparia (VR, PI588259) SD, 13h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM436364 Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436426 V. riparia (VR, PI588259) SD, 13h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM436419 V. riparia (VR, PI588259) SD, 13h 14 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.5 95.7 GSM436403 V. riparia (VR, PI588259) LD, 15h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436418 V. riparia (VR, PI588259) SD, 13h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436420 V. riparia (VR, PI588259) SD, 13h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436423 V. riparia (VR, PI588259) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436408 V. riparia (VR, PI588259) LD, 15h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 2e-9 61 1616927_at CF404313 hypothetical protein LOC100241961 - 2e-15 At3g51850 CPK13 C.G. S.X.
0.06 4e-4 44 1612082_s_at CA809246 hypothetical protein LOC100258857 - 3e-17 At5g19450 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19) C.G. S.X.
0.02 4e-1 34 1617338_at BQ793025 hypothetical protein LOC100262579 - 2e-22 At1g47240 NRAMP2 C.G. S.X.
0.03 2e+0 32 1619991_at CF373415 - - 3e+0 At4g24231 unknown protein C.G. S.X.
0.02 2e+0 32 1619783_at CF516322 - - 4e-4 At3g01480 CYP38 (cyclophilin 38) C.G. S.X.
0.01 2e+0 32 1619357_at CB972316 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase - 3e-71 At1g22410 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative C.G. S.X.
0.02 2e+0 32 1615122_at CF214628 hypothetical protein LOC100249224 - 2e-115 At3g10660 CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2) C.G. S.X.
0.04 2e+0 32 1613792_at CF517954 hypothetical protein LOC100261170 - 1e+1 At5g23410 - C.G. S.X.
0.02 2e+0 32 1613593_at CB975406 hypothetical protein LOC100261399 - 9e-34 At5g27470 seryl-tRNA synthetase / serine--tRNA ligase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 1e-13 77 Arabidopsis thaliana At3g51850 824348 CPK13 member of Calcium Dependent Protein Kinase - - - C.G. S.X.
0.22 4e-29 129 Glycine max GmaAffx.86567.1.S1_at BM520821 - - 1e-12 At5g12480 CPK7 (calmodulin-domain protein kinase 7) C.G. S.X.
0.05 7e-7 54 Hordeum vulgare Contig23641_at Contig23641 - - 1e-17 At3g51850 CPK13 C.G. S.X.
0.04 6e-1 36 Oryza sativa OsAffx.23331.4.S1_at - - - 0 C.G. S.X.
0.15 8e-43 174 Populus trichocarpa PtpAffx.210526.1.S1_s_at pmrna20640 calcium dependent protein kinase 10 /// calcium dependent protein kinase 28 - 2e-149 At1g74740 CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30) C.G. S.X.
0.05 3e-1 36 Triticum aestivum Ta.10026.1.A1_at BJ236992 calcium-dependent protein kinase - 1e-15 At3g51850 CPK13 C.G. S.X.
0.09 4e-8 57 Zea mays Zm.2917.1.A1_at AW091235 Hypothetical protein LOC100192661 - 1e-22 At3g51850 CPK13 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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