Gene omics information

Query gene ID	1617423_at
Gene name	hypothetical protein LOC100245065
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.76	91.5	1617423_at	CB969252	hypothetical protein LOC100245065	-	5e-8	At1g10360	ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18)	S.X.	H.G.	Please select
0.69	88.3	1614445_at	BQ796553	hypothetical protein LOC100250076	-	3e-36	At1g63970	ISPF	S.X.	H.G.	Please select
0.56	79.4	1620681_at	CB001091	hypothetical protein LOC100244005	-	1e-9	At5g11330	monooxygenase family protein	S.X.	H.G.	Please select
0.56	79.4	1615571_at	CB983156	hypothetical protein LOC100250417	-	1e-24	At5g24300	SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1)	S.X.	H.G.	Please select
0.55	77.3	1619183_at	CA814661	hypothetical protein LOC100251027	-	4e-21	At4g27600	pfkB-type carbohydrate kinase family protein	S.X.	H.G.	Please select
0.51	73.2	1616676_at	CA817652	hypothetical protein LOC100266683	-	8e+0	At5g43518	-	S.X.	H.G.	Please select
0.44	64.1	1607986_at	CF606959	hypothetical protein LOC100252345	-	2e-49	At1g19920	APS2	S.X.	H.G.	Please select
0.44	64.1	1612335_at	CF207303	hypothetical protein LOC100259681	-	4e-7	At3g60070	-	S.X.	H.G.	Please select
0.43	61.5	1620973_s_at	BQ798594	hypothetical protein LOC100265749	-	4e+0	At3g22415	unknown protein	S.X.	H.G.	Please select
0.41	58.7	1622679_at	CD798070	hypothetical protein LOC100257992	-	1e-20	At5g06220	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.6	96.0	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
3.4	95.5	GSM147701	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	30
3.4	95.5	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
3.4	95.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
3.2	94.9	GSM147676	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	5
3.1	94.6	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12
3.0	94.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.0	94.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.9	93.8	GSM147677	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	6
2.8	93.4	GSM147682	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	11

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e-5	50	1613204_at	AF501625.1	glutathione-S-transferase /// hypothetical protein LOC100249549 /// hypothetical LOC100267917	-	4e-8	At1g17180	ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)	C.G.	S.X.	Please select
0.02	1e-2	40	1621395_at	CD797719	hypothetical protein LOC100243587 /// hypothetical protein LOC100251575	-	6e-7	At1g78380	ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19)	C.G.	S.X.	Please select
0.03	5e-2	38	1609330_at	AY156048.1	glutathione S-transferase	-	7e-6	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	C.G.	S.X.	Please select
0.02	2e-1	36	1622689_at	CF204846.1	-	-	6e-111	At5g19990	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)	C.G.	S.X.	Please select
0.01	2e-1	36	1607321_at	CB973341	hypothetical protein LOC100241015	-	1e-36	At1g48850	EMB1144 (embryo defective 1144)	C.G.	S.X.	Please select
0.01	8e-1	34	1616002_s_at	CB345569	hypothetical protein LOC100262354	-	2e-100	At2g21330	fructose-bisphosphate aldolase, putative	C.G.	S.X.	Please select
0.01	3e+0	32	1621294_at	CB003395	-	-	3e-1	At5g23950	C2 domain-containing protein	C.G.	S.X.	Please select
0.01	3e+0	32	1621270_at	CB971990	hypothetical protein LOC100252531	-	4e-4	At5g11590	TINY2 (TINY2)	C.G.	S.X.	Please select
0.02	3e+0	32	1620260_s_at	CB005426	hypothetical protein LOC100254957	-	4e-56	At5g20000	26S proteasome AAA-ATPase subunit, putative	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	5e-8	59	Arabidopsis thaliana	At1g10360	837575	ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	7e-2	40	Glycine max	Gma.17538.1.S1_at	AF243360.1	glutathione S-transferase GST 5	-	7e-3	At1g59700	ATGSTU16 (GLUTATHIONE S-TRANSFERASE TAU 16)	C.G.	S.X.	Please select
0.07	6e-6	52	Hordeum vulgare	Contig8958_at	Contig8958	-	-	2e+0	At1g17190	ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)	C.G.	S.X.	Please select
0.08	2e-6	56	Oryza sativa	Os10g0530400	AK105926.1	-	Glutathione-S-transferase Cla47	1e-1	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.17	3e-10	67	Populus trichocarpa	Ptp.5289.1.S1_s_at	BI068908	hypothetical protein	-	1e-7	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	1e-2	42	Triticum aestivum	Ta.12936.1.S1_at	AY064480.1	glutathione-S-transferase Cla47	-	7e+0	At3g09270	ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)	C.G.	S.X.	Please select
0.08	2e-5	50	Zea mays	Zm.564.1.S1_a_at	AF244704.1	glutathione S-transferase GST 39	-	3e-2	At2g36640	ATECP63 (EMBRYONIC CELL PROTEIN 63)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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