CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617386_at

Gene name hypothetical protein LOC100265283

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1617386_at CF372270 hypothetical protein LOC100265283 - 2e-27 At3g02580 STE1 (STEROL 1) S.X. H.G.
0.67 87.9 1612074_at CB339898 similar to kinesin like protein - 6e-21 At5g51720 unknown protein S.X. H.G.
0.67 87.9 1609736_at CA812857 hypothetical protein LOC100248605 - 6e-6 At2g34460 flavin reductase-related S.X. H.G.
0.64 84.7 1621016_at CA817314 similar to transporter-related - 3e-10 At5g20380 PHT4 S.X. H.G.
0.56 79.4 1612484_at CF510569 hypothetical protein LOC100254359 /// hypothetical protein LOC100267643 - 7e-8 At5g10470 kinesin motor protein-related S.X. H.G.
0.50 72.7 1622679_at CD798070 hypothetical protein LOC100257992 - 1e-20 At5g06220 - S.X. H.G.
0.48 68.8 1621073_at CB914439 GDP-mannose-3',5'-epimerase - 0 At5g28840 GME (GDP-D-MANNOSE 3',5'-EPIMERASE) S.X. H.G.
0.46 66.5 1609508_at CB976923 hypothetical protein LOC100242787 - 4e-3 At5g45960 GDSL-motif lipase/hydrolase family protein S.X. H.G.
0.46 66.5 1607482_at CB342115 - - 7e-16 At5g02790 In2-1 protein, putative S.X. H.G.
0.43 61.5 1616613_at CD009052 hypothetical protein LOC100259706 - 6e-1 At4g02920 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.5 98.9 GSM147719 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 48
6.0 98.7 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
6.0 98.7 GSM147718 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 47
5.9 98.6 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
5.1 98.1 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
5.0 98.0 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
4.8 97.8 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
4.7 97.7 GSM147732 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 61
4.6 97.6 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
4.2 97.1 GSM147714 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 43
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.91 0 938 1614812_s_at CF372270 hypothetical protein LOC100265283 - 2e-27 At3g02580 STE1 (STEROL 1) C.G. S.X.
0.65 0 636 1616851_at CF202152.1 hypothetical protein LOC100265283 - 5e-15 At3g02580 STE1 (STEROL 1) C.G. S.X.
0.03 3e-1 34 1618441_at CF212905 hypothetical protein LOC100242450 - 3e-2 At1g21410 SKP2A C.G. S.X.
0.03 1e+0 32 1620933_at CB970393 - - 4e-3 At3g55500 ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16) C.G. S.X.
0.03 1e+0 32 1610412_at CD718024 - - 5e+0 Atmg00810 - C.G. S.X.
0.01 1e+0 32 1608703_at CF510814 ubiquitin-activating enzyme - 1e-24 At5g06460 ATUBA2 C.G. S.X.
0.03 1e+0 32 1606616_at CD718024 - - 5e+0 Atmg00810 - C.G. S.X.
0.02 5e+0 30 1622283_at CB004330 - - 1e+0 At2g02380 ATGSTZ2 C.G. S.X.
0.02 5e+0 30 1622132_at CF204856.1 - - 2e+0 At1g33070 sequence-specific DNA binding / transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 2e-27 123 Arabidopsis thaliana At3g02580 820679 STE1 (STEROL 1) Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype. - - - C.G. S.X.
0.04 2e+0 34 Glycine max GmaAffx.30011.1.S1_at AW164260 - - 3e+0 At5g65220 ribosomal protein L29 family protein C.G. S.X.
0.15 2e-19 95 Hordeum vulgare Contig5409_at Contig5409 - - 3e-18 At3g02580 STE1 (STEROL 1) C.G. S.X.
0.18 2e-16 87 Oryza sativa Os01g0134500 AK111908.1 - Delta-7-sterol-C5(6)-desaturase (EC 1.3.3.-)(Delta-7-C-5 sterol desaturase)(Delta7-sterol-C5-desaturase) 3e-3 At3g02580 STE1 (STEROL 1) C.G. S.X.
0.17 3e-14 79 Populus trichocarpa Ptp.1195.1.S1_at BU824687 - - 9e-24 At3g02580 STE1 (STEROL 1) C.G. S.X.
0.11 1e-18 93 Triticum aestivum Ta.12457.1.S1_x_at BT009523.1 - - 6e-23 At3g02580 STE1 (STEROL 1) C.G. S.X.
0.12 6e-22 103 Zea mays Zm.16296.1.A1_at BM266683 delta-7-sterol-C5 - 8e-16 At3g02580 STE1 (STEROL 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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