CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617382_s_at

Gene name hypothetical protein LOC100262344

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1617382_s_at BQ799139 hypothetical protein LOC100262344 - 6e-174 At1g68010 HPR S.X. H.G.
0.83 94.6 1612275_at CF512634 hypothetical protein LOC100253288 - 4e-13 At5g01920 STN8 S.X. H.G.
0.77 92.3 1618284_at CF516397 hypothetical protein LOC100260169 - 8e-39 At3g55800 SBPASE (sedoheptulose-bisphosphatase) S.X. H.G.
0.67 87.9 1611324_at CB348704 hypothetical protein LOC100263597 - 4e-7 At1g14345 oxidoreductase S.X. H.G.
0.56 79.4 1613167_s_at CA817855 hypothetical protein LOC100260169 - 9e-18 At3g55800 SBPASE (sedoheptulose-bisphosphatase) S.X. H.G.
0.40 57.7 1617901_s_at CA817757 hypothetical protein LOC100259229 - 6e-18 At1g32470 glycine cleavage system H protein, mitochondrial, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 97.1 GSM147687 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 16
4.2 97.1 GSM147705 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation 34
4.2 97.1 GSM147689 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 18
4.1 96.9 GSM147690 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation 19
4.1 96.9 GSM147672 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 1
4.1 96.9 GSM147688 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 17
4.0 96.7 GSM147694 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 23
3.8 96.4 GSM147695 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 24
3.7 96.2 GSM147681 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 10
3.7 96.2 GSM147700 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 29
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 0 1102 1612378_at CA817821 - - 6e-95 At1g68010 HPR C.G. S.X.
0.33 0 706 1617803_s_at CB002166 - - 2e-48 At1g68010 HPR C.G. S.X.
0.02 2e-1 36 1614742_at CD004009 hypothetical protein LOC100255475 - 7e-68 At2g19940 N-acetyl-gamma-glutamyl-phosphate reductase/ NAD or NADH binding / binding / catalytic/ oxidoreductase, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor / protein dimerization C.G. S.X.
0.02 2e-1 36 1614478_at CB971790 hypothetical protein LOC100246144 - 3e-14 At5g55300 TOP1ALPHA (DNA TOPOISOMERASE I ALPHA) C.G. S.X.
0.02 2e-1 36 1610990_at CD004009 - - 7e-68 At2g19940 N-acetyl-gamma-glutamyl-phosphate reductase/ NAD or NADH binding / binding / catalytic/ oxidoreductase, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor / protein dimerization C.G. S.X.
0.01 3e+0 32 1620612_s_at CF208882 similar to ADP-ribosylation factor - 4e-128 At2g47170 ARF1A1C C.G. S.X.
0.02 3e+0 32 1620458_at BQ795444 hypothetical protein LOC100266069 - 4e+0 At3g23650 protein kinase-related C.G. S.X.
0.02 3e+0 32 1620375_at CA814054 hypothetical protein LOC100252099 - 3e-13 At3g05840 ATSK12 C.G. S.X.
0.02 3e+0 32 1619796_at CF200774.1 - - 2e-58 At1g22780 PFL (POINTED FIRST LEAVES) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.63 6e-174 611 Arabidopsis thaliana At1g68010 843129 HPR Encodes hydroxypyruvate reductase. - - - C.G. S.X.
0.64 2e-177 623 Glycine max Gma.2503.1.S1_s_at AF503361.1 oxidoreductase /// conversion of hydroxypyruvate to glycerate - 6e-94 At1g68010 HPR C.G. S.X.
0.12 5e-25 115 Hordeum vulgare Contig2515_at Contig2515 - - 6e-54 At1g68010 HPR C.G. S.X.
0.07 8e-27 123 Oryza sativa Os02g0101500 AK067642.1 - Hydroxypyruvate reductase (EC 1.1.1.29) 7e-49 At1g68010 HPR C.G. S.X.
0.56 0 741 Populus trichocarpa PtpAffx.3758.1.S1_at CV278392 hypothetical protein - 1e-119 At1g68010 HPR C.G. S.X.
0.12 1e-24 115 Triticum aestivum Ta.28775.1.S1_at CA680217 - - 5e-39 At1g68010 HPR C.G. S.X.
0.13 2e-30 133 Zea mays Zm.17494.1.A1_at CK145115 hypothetical protein LOC100193709 - 3e-20 At1g68010 HPR C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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