CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617353_at

Gene name hypothetical protein LOC100244602

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 72.7 1617353_at CB972878 hypothetical protein LOC100244602 - 2e-36 At1g55200 protein kinase family protein S.X. H.G.
0.29 37.7 1607091_at CB970875 hypothetical protein LOC100262262 - 1e-15 At2g36910 ABCB1 (ATP BINDING CASSETTE SUBFAMILY B1) S.X. H.G.
0.29 37.7 1606444_at CB972596 hypothetical protein LOC100244602 - 9e-2 At1g29580 unknown protein S.X. H.G.
0.07 7.8 1612633_at CF514304 hypothetical protein LOC100248215 - 3e-10 At3g56590 hydroxyproline-rich glycoprotein family protein S.X. H.G.
0.06 6.8 1620161_at CF513760 hypothetical protein LOC100258606 - 8e-1 At3g02640 unknown protein S.X. H.G.
0.04 5.2 1611856_at CF214981 hypothetical protein LOC100240940 - 4e-86 At3g16630 KINESIN-13A S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.5 99.7 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
5.1 98.1 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
4.5 97.5 GSM436355 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436357 Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.7 96.2 GSM436373 Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.6 96.0 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
3.5 95.7 GSM436360 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436352 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.3 95.2 GSM436358 Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-10 65 1606444_at CB972596 hypothetical protein LOC100244602 - 9e-2 At1g29580 unknown protein C.G. S.X.
0.03 9e-2 36 1616357_at CF516994 hypothetical protein LOC100255530 - 5e-16 At2g17220 protein kinase, putative C.G. S.X.
0.02 9e-2 36 1613856_at CD012158 hypothetical protein LOC100264793 - 4e-89 At1g31420 FEI1 (FEI 1) C.G. S.X.
0.03 9e-2 36 1606724_at CF215838 hypothetical protein LOC100247480 - 4e-9 At1g25530 lysine and histidine specific transporter, putative C.G. S.X.
0.02 3e-1 34 1620671_at CA817707 hypothetical protein LOC100261049 - 1e-13 At1g11340 S-locus lectin protein kinase family protein C.G. S.X.
0.03 1e+0 32 1611489_at CF516497 hypothetical protein LOC100254530 - 3e-17 At4g14550 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14) C.G. S.X.
0.03 1e+0 32 1611390_a_at CF516497 hypothetical protein LOC100254530 - 3e-17 At4g14550 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14) C.G. S.X.
0.02 1e+0 32 1610970_at CB343978 - - 1e-63 At4g14550 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14) C.G. S.X.
0.02 5e+0 30 1622841_at CF511691 - - 7e-37 At4g27120 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 2e-36 153 Arabidopsis thaliana At1g55200 841963 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA - - - C.G. S.X.
0.49 2e-40 167 Glycine max GmaAffx.74865.1.S1_at BM269818 - - 1e-44 At5g56790 protein kinase family protein C.G. S.X.
0.29 2e-28 125 Hordeum vulgare Contig16523_at Contig16523 - - 6e-13 At1g55200 protein kinase family protein C.G. S.X.
0.23 2e-47 190 Oryza sativa Os01g0602800 CB679471 - Protein kinase domain containing protein 1e-37 At3g13690 protein kinase family protein C.G. S.X.
0.43 7e-117 420 Populus trichocarpa PtpAffx.154914.1.S1_s_at CN518308 hypothetical protein - 6e-57 At3g13690 protein kinase family protein C.G. S.X.
0.05 5e-6 52 Triticum aestivum TaAffx.111907.1.S1_at CA630712 - - 5e-6 At1g09440 protein kinase family protein C.G. S.X.
0.22 1e-26 119 Zea mays Zm.925.1.A1_at AW067104 - - 1e-4 At5g56790 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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