CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617350_at

Gene name hypothetical protein LOC100243953

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.5 1617350_at CB975555 hypothetical protein LOC100243953 - 1e+0 At5g22430 unknown protein S.X. H.G.
0.71 89.5 1610370_s_at CB975555 hypothetical protein LOC100243953 - 1e+0 At5g22430 unknown protein S.X. H.G.
0.46 66.5 1609022_at CF371738 hypothetical protein LOC100250008 - 1e+0 At4g13690 unknown protein S.X. H.G.
0.44 64.1 1621911_at CF214080 hypothetical protein LOC100252396 - 3e-64 At3g15060 AtRABA1g (Arabidopsis Rab GTPase homolog A1g) S.X. H.G.
0.43 61.5 1616767_at CF213759 hypothetical protein LOC100259220 - 4e+0 At4g03298 unknown protein S.X. H.G.
0.35 48.5 1618413_at BQ797853 hypothetical protein LOC100256600 - 0 At4g14960 TUA6 S.X. H.G.
0.27 34.0 1616858_at BQ798567 hypothetical protein LOC100252226 /// hypothetical protein LOC100254728 - 4e-3 At3g12740 ALIS1 (ALA-INTERACTING SUBUNIT 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 97.1 GSM436412 V. riparia (VR, PI588259) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
4.1 96.9 GSM436388 V. riparia (VR, PI588259) LD, 15h 1 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.4 95.5 GSM436393 V. riparia (VR, PI588259) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436389 V. riparia (VR, PI588259) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
3.0 94.2 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.9 93.8 GSM287871 Green hard berry C4 from plant 1 cluster distal position, biological rep 2 GSE11406 Expression data in individual grape berries during ripening initation
2.9 93.8 GSM287883 Green soft berry A23 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
2.8 93.4 GSM436381 Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436390 V. riparia (VR, PI588259) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 1152 1610370_s_at CB975555 hypothetical protein LOC100243953 - 1e+0 At5g22430 unknown protein C.G. S.X.
0.64 0 662 1608514_at CF207975 - - 1e+0 At4g19980 unknown protein C.G. S.X.
0.03 1e-1 36 1622551_a_at CF208050 hypothetical protein LOC100252010 - 4e+0 At5g62080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.03 1e-1 36 1611119_at CF208050 - - 4e+0 At5g62080 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 2e+0 32 1619325_at CF211836 hypothetical protein LOC100263459 - 6e-4 At3g14660 CYP72A13 C.G. S.X.
0.02 2e+0 32 1616577_at BQ792277 hypothetical protein LOC100261345 - 6e+0 At3g54620 BZIP25 (BASIC LEUCINE ZIPPER 25) C.G. S.X.
0.02 2e+0 32 1614753_at CF415333 hypothetical protein LOC100241307 - 2e-4 At2g43090 aconitase C-terminal domain-containing protein C.G. S.X.
0.03 6e+0 30 1622474_at CF373640 - - 3e+0 At1g54445 - C.G. S.X.
0.03 6e+0 30 1621776_at CD715288 hypothetical protein LOC100267239 - 2e+0 At2g46530 ARF11 (AUXIN RESPONSE FACTOR 11) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At5g22430 832304 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P - - - C.G. S.X.
0.04 1e-4 48 Glycine max Gma.5029.1.S1_at CD413164 - - 5e-13 At5g15350 plastocyanin-like domain-containing protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HA11I24u_x_at HA11I24u - - 2e+0 At4g27380 unknown protein C.G. S.X.
0.04 3e+0 34 Oryza sativa Os12g0522740 9640.m03268 - - 2e-1 At5g23680 sterile alpha motif (SAM) domain-containing protein C.G. S.X.
0.24 4e-38 159 Populus trichocarpa Ptp.763.1.S1_s_at CK088840 hypothetical protein - 3e-5 At5g15350 plastocyanin-like domain-containing protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.107578.1.S1_at CA697808 - - 1e+0 At3g14080 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative C.G. S.X.
0.03 5e-1 34 Zea mays Zm.18425.1.A1_at AI677409 disulfide oxidoreductase/ monooxygenase/ oxidoreductase /// disulfide oxidoreductase/ monooxygenase/ oxidoreductase - 7e+0 At5g39470 F-box family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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