CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617345_s_at

Gene name hypothetical protein LOC100247984

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1617345_s_at CF514945 hypothetical protein LOC100247984 - 3e-21 At1g64720 CP5 S.X. H.G.
0.80 93.6 1620267_at CB972336 hypothetical protein LOC100264696 - 7e-9 At5g20140 SOUL heme-binding family protein S.X. H.G.
0.73 90.8 1612258_at CD003740 hypothetical LOC100252450 - 8e-22 At1g17220 FUG1 (fu-gaeri1) S.X. H.G.
0.67 87.9 1607793_at CF515792 hypothetical protein LOC100263187 - 9e-11 At5g02120 OHP (ONE HELIX PROTEIN) S.X. H.G.
0.40 57.7 1619987_at CB910180 hypothetical protein LOC100256191 - 9e-17 At1g64860 SIGA (SIGMA FACTOR A) S.X. H.G.
0.33 45.7 1622249_at CA817903 glycolate oxidase-like - 6e-153 At3g14420 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.8 98.6 GSM147700 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 29
4.8 97.8 GSM147707 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 36
4.8 97.8 GSM147688 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 17
4.5 97.5 GSM147694 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 23
4.5 97.5 GSM147695 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation 24
4.4 97.3 GSM147690 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation 19
4.4 97.3 GSM147689 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 18
4.1 96.9 GSM147706 Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation 35
4.1 96.9 GSM322368 genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
3.8 96.4 GSM322370 genotype: Incrocio Manzoni - disease type: Healthy - rep2 GSE12842 Gene expression in grapevine in response to Bois noir infection
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-8 57 1618757_at BQ796143 hypothetical protein LOC100263172 - 2e-44 At4g14500 - C.G. S.X.
0.02 7e-1 34 1622537_at CB917669 - - 1e-22 At5g44730 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.02 7e-1 34 1622053_at BQ798028 - - 7e-8 At5g11060 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4) C.G. S.X.
0.02 7e-1 34 1618716_at CB917669 similar to Os06g0665100 - 1e-22 At5g44730 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.01 3e+0 32 1618643_at CF208002 hypothetical protein LOC100248183 - 7e-1 At3g09930 GDSL-motif lipase/hydrolase family protein C.G. S.X.
0.01 3e+0 32 1618573_at CF216076 - - 3e-2 At1g29220 transcriptional regulator family protein C.G. S.X.
0.01 3e+0 32 1611992_at CB976197 hypothetical protein LOC100255916 - 8e-43 At2g19950 GC1 (Golgin Candidate 1) C.G. S.X.
0.02 3e+0 32 1607911_at BQ794094 hypothetical protein LOC100243725 - 3e-38 At1g75330 OTC (ORNITHINE CARBAMOYLTRANSFERASE) C.G. S.X.
0.01 1e+1 30 1622052_s_at CF213694 hypothetical protein LOC100248585 - 2e-21 At4g39220 ATRER1A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 3e-21 103 Arabidopsis thaliana At1g64720 842780 CP5 membrane related protein CP5 - - - C.G. S.X.
0.18 5e-30 133 Glycine max Gma.3645.1.S1_at BI317014 - - 7e-14 At1g64720 CP5 C.G. S.X.
0.11 5e-9 61 Hordeum vulgare Contig3339_at Contig3339 - - 9e-6 At1g64720 CP5 C.G. S.X.
0.11 2e-30 135 Oryza sativa Os04g0119500 AK063189.1 - Membrane related protein-like 2e-2 At1g64720 CP5 C.G. S.X.
0.40 2e-128 460 Populus trichocarpa PtpAffx.1508.1.S1_at CV253876 hypothetical protein - 1e-23 At1g64720 CP5 C.G. S.X.
0.07 2e-4 48 Triticum aestivum Ta.12695.1.S1_at CD373734 - - 8e-3 At5g54170 - C.G. S.X.
0.02 4e+0 32 Zea mays Zm.12304.1.A1_at CF637007 hypothetical protein LOC100274389 - 2e+0 At1g64720 CP5 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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