Gene omics information

Query gene ID	1617328_at
Gene name	hypothetical protein LOC100247950
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.7	1617328_at	CF214435	hypothetical protein LOC100247950	-	8e-43	At4g36750	quinone reductase family protein	S.X.	H.G.	Please select
0.50	72.7	1615815_at	CF207323	similar to ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)	-	5e-23	At3g49290	ABIL2 (ABL INTERACTOR-LIKE PROTEIN 2)	S.X.	H.G.	Please select
0.47	67.7	1620426_at	CF515986	similar to DNA-binding protein	-	1e-20	At1g13960	WRKY4	S.X.	H.G.	Please select
0.40	57.7	1610068_at	CD711769	hypothetical protein LOC100252154	-	2e-19	At2g36670	aspartyl protease family protein	S.X.	H.G.	Please select
0.33	45.7	1613676_at	CB002629	hypothetical protein LOC100266011	-	4e+0	At3g19200	unknown protein	S.X.	H.G.	Please select
0.27	34.0	1615915_at	CF518741	hypothetical protein LOC100267889	-	4e+0	At2g24880	self-incompatibility protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.1	99.6	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
9.0	99.5	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
8.1	99.4	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.5	98.9	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
6.3	98.8	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
5.4	98.3	GSM299454	B_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.9	97.9	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.9	97.9	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.6	97.6	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.5	97.5	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.10	2e-9	61	1622745_at	BQ796736	hypothetical protein LOC100243616 /// hypothetical LOC100241452 /// hypothetical LOC100241972	-	4e-11	At5g54500	FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)	C.G.	S.X.	Please select
0.04	9e-9	59	1620931_at	CB915389	hypothetical LOC100243703	-	2e-2	At3g55940	phosphoinositide-specific phospholipase C, putative	C.G.	S.X.	Please select
0.03	9e-9	59	1614766_at	BQ799111	hypothetical protein LOC100244101	-	5e-29	At4g32330	-	C.G.	S.X.	Please select
0.04	9e-9	59	1608339_at	CB915389	-	-	2e-2	At3g55940	phosphoinositide-specific phospholipase C, putative	C.G.	S.X.	Please select
0.04	4e-8	57	1618861_s_at	CF604714	-	-	1e-9	At2g44730	transcription factor	C.G.	S.X.	Please select
0.03	1e-7	56	1621447_s_at	CF404909	hypothetical protein LOC100261458	-	1e-85	At3g26340	20S proteasome beta subunit E, putative	C.G.	S.X.	Please select
0.03	1e-7	56	1619057_at	CD799697	hypothetical protein LOC100252925	-	1e-17	At1g56700	pyrrolidone-carboxylate peptidase family protein	C.G.	S.X.	Please select
0.04	1e-7	56	1615283_at	CD799238	hypothetical protein LOC100258625	-	2e-3	At4g27270	quinone reductase family protein	C.G.	S.X.	Please select
0.03	1e-7	56	1614593_at	CF511805	hypothetical protein LOC100246457	-	2e-96	At4g10340	LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	8e-43	174	Arabidopsis thaliana	At4g36750	829828	quinone reductase family protein	F:oxidoreductase activity, FMN binding;P:negative regulation of transcription;C:plasma membrane;BOFPAMV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.33	3e-15	83	Glycine max	Gma.8709.1.S1_at	BU765404	-	-	4e-37	At4g36750	quinone reductase family protein	C.G.	S.X.	Please select
0.17	4e-15	81	Hordeum vulgare	Contig9053_at	Contig9053	-	-	5e-20	At4g36750	quinone reductase family protein	C.G.	S.X.	Please select
0.16	7e-17	89	Oryza sativa	Os10g0436800	BI306066	-	Flavodoxin/nitric oxide synthase domain containingprotein	6e-12	At4g36750	quinone reductase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.32	3e-40	167	Populus trichocarpa	Ptp.2505.1.S1_s_at	CV226668	hypothetical protein	-	4e-44	At4g36750	quinone reductase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.11	1e-1	38	Triticum aestivum	TaAffx.91529.1.S1_at	BJ319660	-	-	3e-11	At5g54500	FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)	C.G.	S.X.	Please select
0.20	9e-13	73	Zea mays	Zm.4675.1.S1_at	BM075189	flavoprotein wrbA	-	4e-1	At4g36750	quinone reductase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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