Gene omics information

Query gene ID	1617311_at
Gene name	hypothetical protein LOC100257045
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	72.7	1617311_at	CB344329	hypothetical protein LOC100257045	-	1e-16	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	S.X.	H.G.	Please select
0.85	94.9	1617425_at	BQ799379	hypothetical protein LOC100242172	-	2e-12	At5g21920	YGGT family protein	S.X.	H.G.	Please select
0.85	94.9	1610525_at	CA814677	hypothetical protein LOC100260680	-	2e-15	At1g50900	-	S.X.	H.G.	Please select
0.76	91.5	1618209_at	CF373021	-	-	3e-17	At4g09010	APX4 (ASCORBATE PEROXIDASE 4)	S.X.	H.G.	Please select
0.67	87.9	1608376_at	CF373831	similar to ribosomal protein S17	-	3e-29	At1g48350	ribosomal protein L18 family protein	S.X.	H.G.	Please select
0.59	80.6	1621285_at	CB347466	hypothetical protein LOC100251632	-	3e-24	At4g01310	ribosomal protein L5 family protein	S.X.	H.G.	Please select
0.58	79.8	1613844_at	CF404099	hypothetical protein LOC100252738	-	1e-17	At3g23570	dienelactone hydrolase family protein	S.X.	H.G.	Please select
0.56	79.4	1612114_at	BQ797697	hypothetical protein LOC100264713	-	1e+0	At5g60000	unknown protein	S.X.	H.G.	Please select
0.52	73.9	1608391_at	CA817568	hypothetical protein LOC100255376	-	5e-12	At1g60230	radical SAM domain-containing protein	S.X.	H.G.	Please select
0.50	72.7	1609873_at	CB341501	hypothetical protein LOC100247523	-	2e-69	At1g67280	lactoylglutathione lyase, putative / glyoxalase I, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.7	99.6	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
9.1	99.5	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
8.9	99.5	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
8.1	99.4	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
8.1	99.4	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
8.0	99.3	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
7.9	99.3	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9
7.9	99.3	GSM147704	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	33
7.6	99.3	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
7.1	99.1	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.23	6e-65	246	1615364_at	CB344806	-	-	2e-8	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	C.G.	S.X.	Please select
0.14	5e-7	54	1614493_at	CB341693	hypothetical protein LOC100266472	-	3e-8	At5g50250	31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative	C.G.	S.X.	Please select
0.04	2e-6	52	1607172_at	CF202914.1	-	-	2e-1	At5g14790	binding	C.G.	S.X.	Please select
0.03	3e-5	48	1617457_at	CD012455	hypothetical protein LOC100267543	-	5e+0	At5g02240	binding / catalytic/ coenzyme binding	C.G.	S.X.	Please select
0.03	3e-5	48	1613640_at	CD012455	-	-	5e+0	At5g02240	binding / catalytic/ coenzyme binding	C.G.	S.X.	Please select
0.03	3e-5	48	1606656_at	CF212763	hypothetical protein LOC100262729	-	1e-1	At4g22460	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.04	1e-4	46	1615919_s_at	CB339385	hypothetical protein LOC100258771	-	2e-2	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	C.G.	S.X.	Please select
0.03	5e-4	44	1622558_at	CF512488	hypothetical protein LOC100243988	-	1e+0	Atcg00270	-	C.G.	S.X.	Please select
0.02	2e-3	42	1616302_at	CB912509	ripening-related protein-like	-	4e-11	At5g02230	haloacid dehalogenase-like hydrolase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.31	1e-16	87	Arabidopsis thaliana	At4g24770	828579	RBP31 (31-KDA RNA BINDING PROTEIN)	Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.12	3e-33	143	Glycine max	Gma.5702.1.S1_a_at	CD413767	-	-	1e-11	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	C.G.	S.X.	Please select
0.04	8e-4	44	Hordeum vulgare	HS17I13u_s_at	HS17I13u	-	-	7e-1	At1g42480	unknown protein	C.G.	S.X.	Please select
0.05	2e-4	48	Oryza sativa	Os.47913.1.A1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.26	7e-59	228	Populus trichocarpa	PtpAffx.2393.1.A1_at	CV244436	hypothetical protein	-	6e-23	At5g50250	31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.09	7e-6	52	Triticum aestivum	Ta.28242.1.S1_at	CK216078	-	-	3e-9	At5g50250	31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative	C.G.	S.X.	Please select
0.11	3e-12	71	Zea mays	Zm.14.1.S1_at	BI430690	nucleic acid binding protein1	-	1e-8	At5g50250	31 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein RNP-T, putative / RNA-binding protein 1/2/3, putative / RNA-binding protein cp31, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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