CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617194_at

Gene name hypothetical protein LOC100264514

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.8 1617194_at BQ794485 hypothetical protein LOC100264514 - 5e-1 At5g37520 unknown protein S.X. H.G.
0.60 81.9 1612995_at CD012259 - - 4e-18 At3g13340 WD-40 repeat family protein S.X. H.G.
0.55 77.3 1612817_at CB002820 hypothetical protein LOC100267132 - 3e-1 At3g62330 zinc knuckle (CCHC-type) family protein S.X. H.G.
0.44 64.1 1607079_at BQ797339 hypothetical protein LOC100263131 - 2e+0 At3g56490 zinc-binding protein, putative / protein kinase C inhibitor, putative S.X. H.G.
0.40 57.7 1610845_at CF208629 hypothetical protein LOC100245365 - 2e+0 At1g68030 PHD finger protein-related S.X. H.G.
0.24 28.7 1608869_s_at CF514065 glyceraldehyde-3-phosphate dehydrogenase - 4e-41 At3g04120 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
2.2 89.9 GSM436363 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.1 89.1 GSM436387 Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436362 Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436385 Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
1.9 87.2 GSM436382 Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
1.8 86.0 GSM436386 Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
1.8 86.0 GSM147683 Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 12
1.8 86.0 GSM436354 Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
1.7 84.7 GSM287869 Green hard berry C3 from plant 1 cluster distal position, biological rep 1 GSE11406 Expression data in individual grape berries during ripening initation
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 32 1615155_at CF210513 - - 2e+1 At5g34869 unknown protein C.G. S.X.
0.02 2e+0 32 1612977_at CF204464.1 hypothetical protein LOC100266745 - 5e-53 At3g60250 CKB3 C.G. S.X.
0.01 2e+0 32 1611860_at CF209952 hypothetical protein LOC100241887 - 2e-13 At1g15820 LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6) C.G. S.X.
0.03 2e+0 32 1610167_at CF403642 hypothetical protein LOC100254398 - 4e-12 At5g14220 HEMG2 C.G. S.X.
0.02 2e+0 32 1608305_at CF415367 hypothetical protein LOC100258034 - 5e-3 At3g23090 - C.G. S.X.
0.02 9e+0 30 1622445_at CD714976 - - 3e-4 At2g38330 MATE efflux family protein C.G. S.X.
0.02 9e+0 30 1622121_at BQ799039 - - 7e+0 Atcg00070 - C.G. S.X.
0.02 9e+0 30 1622053_at BQ798028 - - 7e-8 At5g11060 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4) C.G. S.X.
0.02 9e+0 30 1621129_at CF205522.1 - - 7e-1 At2g02060 transcription factor C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At5g37520 833730 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF - - - C.G. S.X.
0.03 2e-4 48 Glycine max Gma.9631.5.S1_at AW156269 - - 3e+0 At5g51870 AGL71 (AGAMOUS-LIKE 71) C.G. S.X.
0.04 1e-3 44 Hordeum vulgare Contig11022_at Contig11022 - - 6e+0 At4g16095 disease resistance protein-related C.G. S.X.
0.03 3e-4 48 Oryza sativa Os.14272.1.A1_at - - - 0 C.G. S.X.
0.13 3e-15 83 Populus trichocarpa PtpAffx.120808.1.A1_at CV241033 hypothetical protein - 1e-1 At1g59860 17.6 kDa class I heat shock protein (HSP17.6A-CI) C.G. S.X.
0.04 2e-3 44 Triticum aestivum Ta.7646.1.S1_at CD907772 - - 3e+0 At4g32420 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.02 1e+1 30 Zea mays Zm.7941.1.A1_at BM080529 - - 1e+0 At3g50040 unknown protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage