Gene omics information

Query gene ID	1617182_at
Gene name
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1617182_at	CB921793	-	-	5e-3	At1g62240	unknown protein	S.X.	H.G.	Please select
0.18	19.4	1607015_at	CB346470	hypothetical protein LOC100249954	-	1e-12	At3g09860	unknown protein	S.X.	H.G.	Please select
0.13	13.3	1608985_at	BQ800629	hypothetical protein LOC100246892	-	4e-1	At3g04990	-	S.X.	H.G.	Please select
0.07	7.8	1616609_at	BM437555	hypothetical protein LOC100247612	-	4e-7	At5g42850	-	S.X.	H.G.	Please select
0.06	6.8	1612832_at	CB970370	hypothetical protein LOC100258382	-	7e-3	At3g27100	-	S.X.	H.G.	Please select
0.05	6.0	1616873_at	CF403277	hypothetical protein LOC100241265	-	2e-1	At4g21865	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.8	99.8	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
7.6	99.3	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.7	97.7	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
4.5	97.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
4.4	97.3	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.7	96.2	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
3.2	94.9	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.2	94.9	GSM287883	Green soft berry A23 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	1338	1613343_at	CB921793	hypothetical protein LOC100244627	-	5e-3	At1g62240	unknown protein	C.G.	S.X.	Please select
0.04	2e-6	52	1614844_at	CB005866	-	-	1e-3	At1g11790	ADT1 (arogenate dehydratase 1)	C.G.	S.X.	Please select
0.04	2e-6	52	1611097_at	CB005866	hypothetical protein LOC100265426	-	1e-3	At1g11790	ADT1 (arogenate dehydratase 1)	C.G.	S.X.	Please select
0.02	3e-5	48	1622219_at	CF403872	hypothetical protein LOC100243554	-	9e-10	At4g00755	F-box family protein	C.G.	S.X.	Please select
0.03	3e-5	48	1618354_at	CD711383	hypothetical protein LOC100257006	-	1e+0	At3g52820	PAP22 (PURPLE ACID PHOSPHATASE 22)	C.G.	S.X.	Please select
0.03	3e-5	48	1615736_at	CD711591	-	-	7e+0	At5g40570	surfeit locus protein 2 family protein / SURF2 family protein	C.G.	S.X.	Please select
0.03	3e-5	48	1614583_at	CD711383	-	-	1e+0	At3g52820	PAP22 (PURPLE ACID PHOSPHATASE 22)	C.G.	S.X.	Please select
0.03	3e-5	48	1613755_at	CB975521	hypothetical protein LOC100253264	-	9e-2	At4g04080	ISU3 (ISCU-LIKE 3)	C.G.	S.X.	Please select
0.03	3e-5	48	1613459_at	BQ798130	hypothetical protein LOC100250844	-	6e-6	At4g29660	EMB2752 (EMBRYO DEFECTIVE 2752)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-3	42	Arabidopsis thaliana	At1g62240	842521	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.22	6e-25	115	Glycine max	Gma.3722.1.S1_at	AW309441	-	-	8e-6	At1g56200	emb1303 (embryo defective 1303)	C.G.	S.X.	Please select
0.05	3e-6	52	Hordeum vulgare	HVSMEh0094M14f_s_at	HVSMEh0094M14f	-	-	2e-1	At4g21215	unknown protein	C.G.	S.X.	Please select
0.04	3e-3	44	Oryza sativa	OsAffx.25669.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.18	2e-18	93	Populus trichocarpa	PtpAffx.95134.1.A1_at	CV258693	-	-	4e-1	At3g61210	embryo-abundant protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-6	54	Triticum aestivum	TaAffx.105798.1.S1_s_at	CA729651	-	-	3e+0	At3g44590	60S acidic ribosomal protein P2 (RPP2D)	C.G.	S.X.	Please select
0.04	2e-6	52	Zea mays	Zm.14917.1.A1_at	BM378490	-	-	9e-1	At1g04330	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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