Gene omics information

Query gene ID	1617158_at
Gene name	hypothetical protein LOC100251931
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	89.5	1617158_at	CB920605	hypothetical protein LOC100251931	-	4e-17	At5g19630	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1612088_at	CF403659	hypothetical protein LOC100252369	-	6e-1	At4g08230	glycine-rich protein	S.X.	H.G.	Please select
0.61	83.2	1618481_at	CF213085	hypothetical protein LOC100266840	-	1e-13	At1g65320	CBS domain-containing protein	S.X.	H.G.	Please select
0.60	81.9	1610946_at	CF518886	hypothetical protein LOC100256249	-	2e-1	At1g31500	endonuclease/exonuclease/phosphatase family protein	S.X.	H.G.	Please select
0.55	77.3	1606933_a_at	CB007886	-	-	1e-20	At1g01360	unknown protein	S.X.	H.G.	Please select
0.46	66.5	1616802_s_at	CF200896.1	-	-	2e+0	At2g43060	transcription factor	S.X.	H.G.	Please select
0.40	57.7	1616669_at	CF209174	hypothetical protein LOC100246496	-	2e-5	At4g00560	methionine adenosyltransferase regulatory beta subunit-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
3.3	95.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.8	93.4	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.7	93.0	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.6	92.5	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.4	91.3	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.3	90.7	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.3	90.7	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.3	90.7	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.2	89.9	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26
2.2	89.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-1	34	1613147_at	CB349523	hypothetical protein LOC100264586	-	1e-9	At1g69485	structural constituent of ribosome	C.G.	S.X.	Please select
0.02	6e-1	34	1612642_at	CB970994	hypothetical protein LOC100244706	-	5e+0	At3g43570	GDSL-motif lipase, putative	C.G.	S.X.	Please select
0.02	2e+0	32	1615914_at	CB970883	-	-	1e+0	At5g51510	unknown protein	C.G.	S.X.	Please select
0.02	9e+0	30	1622552_at	CB008694	-	-	9e-15	At2g46910	plastid-lipid associated protein PAP / fibrillin family protein	C.G.	S.X.	Please select
0.02	9e+0	30	1622127_at	CK138186.1	hypothetical LOC100262546	-	9e-1	At3g50070	CYCD3	C.G.	S.X.	Please select
0.02	9e+0	30	1620931_at	CB915389	hypothetical LOC100243703	-	2e-2	At3g55940	phosphoinositide-specific phospholipase C, putative	C.G.	S.X.	Please select
0.02	9e+0	30	1620859_at	CF512570	hypothetical protein LOC100245328	-	2e-33	At3g14860	NHL repeat-containing protein	C.G.	S.X.	Please select
0.02	9e+0	30	1618727_at	CB008694	hypothetical protein LOC100247185	-	9e-15	At2g46910	plastid-lipid associated protein PAP / fibrillin family protein	C.G.	S.X.	Please select
0.02	9e+0	30	1618334_at	CK138186.1	-	-	9e-1	At3g50070	CYCD3	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	4e-17	89	Arabidopsis thaliana	At5g19630	832083	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BOPAF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.32	5e-17	89	Glycine max	GmaAffx.27158.3.S1_at	CA802545	-	-	5e-3	At5g19630	unknown protein	C.G.	S.X.	Please select
0.05	1e-9	63	Hordeum vulgare	Contig14176_at	Contig14176	-	-	5e-1	At1g16210	unknown protein	C.G.	S.X.	Please select
0.04	2e-8	61	Oryza sativa	Os02g0717100	AK063741.1	-	Esterase/lipase/thioesterase domain containingprotein	5e-4	At5g19630	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.41	9e-62	238	Populus trichocarpa	Ptp.4528.1.S1_at	DN490436	hypothetical protein	-	2e+0	At5g19630	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e-1	36	Triticum aestivum	Ta.27563.1.A1_at	BT009022.1	-	-	8e-1	At1g24240	ribosomal protein L19 family protein	C.G.	S.X.	Please select
0.06	1e-5	50	Zea mays	Zm.12514.1.A1_at	BM379568	hypothetical protein LOC100193276	-	3e-1	At2g37410	ATTIM17-2	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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