CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1617038_at

Gene name

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.9 1617038_at CA814579 - - 2e+0 At5g02050 mitochondrial glycoprotein family protein / MAM33 family protein S.X. H.G.
0.56 79.4 1618899_at CF206580.1 - - 7e-18 At5g57040 lactoylglutathione lyase family protein / glyoxalase I family protein S.X. H.G.
0.46 66.5 1606916_at CF202248.1 - - 1e-1 At3g10640 VPS60.1 S.X. H.G.
0.43 61.5 1610891_x_at CF201787.1 - - 8e-1 At4g34760 auxin-responsive family protein S.X. H.G.
0.40 57.7 1609860_at CF513464 - - 7e-3 At3g61900 auxin-responsive family protein S.X. H.G.
0.34 46.8 1609887_at CF205557.1 - - 1e-19 At5g53160 unknown protein S.X. H.G.
0.30 39.4 1621897_x_at CF200896.1 - - 2e+0 At2g43060 transcription factor S.X. H.G.
0.29 37.7 1611528_at CF202616.1 hypothetical protein LOC100254781 - 1e+0 At5g45360 F-box family protein S.X. H.G.
0.24 28.7 1607102_at CF606606 - - 2e+0 At3g24506 unknown protein S.X. H.G.
0.22 25.6 1620272_at BQ797367 hypothetical protein LOC100252883 - 2e+0 At2g37330 ALS3 (ALUMINUM SENSITIVE 3) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.0 99.9 GSM147743 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 72
14.8 99.9 GSM147720 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 49
12.9 99.8 GSM147742 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 71
12.6 99.8 GSM147724 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation 53
11.6 99.7 GSM147738 Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation 67
9.5 99.6 GSM147725 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation 54
8.2 99.4 GSM147731 Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation 60
8.0 99.3 GSM147708 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation 37
6.6 98.9 GSM147739 Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation 68
6.4 98.9 GSM147730 Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation 59
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-1 32 1620959_s_at CB915151 myb-relared transcription factor VvMYBA2 - 4e+0 At5g19855 unknown protein C.G. S.X.
0.02 6e-1 32 1615798_at AB073013.1 - - 1e-5 At1g66370 MYB113 (myb domain protein 113) C.G. S.X.
0.02 6e-1 32 1614453_at BQ798141 hypothetical protein LOC100259029 - 2e+0 At5g18910 protein kinase family protein C.G. S.X.
0.03 2e+0 30 1622646_at CD715208 - - 1e+0 At2g16710 hesB-like domain-containing protein C.G. S.X.
0.04 2e+0 30 1619974_at CF415318 hypothetical protein LOC100250685 - 1e-3 At5g17690 TFL2 (TERMINAL FLOWER 2) C.G. S.X.
0.04 2e+0 30 1619392_at CF513478 hypothetical protein LOC100259847 - 4e+0 At3g24060 self-incompatibility protein-related C.G. S.X.
0.04 2e+0 30 1617329_at BQ798056 hypothetical protein LOC100255368 - 5e-49 At3g19760 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative C.G. S.X.
0.04 2e+0 30 1612604_at CF568966 - - 6e-2 At5g42635 glycine-rich protein C.G. S.X.
0.03 2e+0 30 1609964_at CD715208 - - 1e+0 At2g16710 hesB-like domain-containing protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 32 Arabidopsis thaliana At5g02050 831729 mitochondrial glycoprotein family protein / MAM33 family protein F:unknown;P:biological_process unknown;C:chloroplast, mitochondrial matrix;PFOMB - - - C.G. S.X.
0.06 3e+0 32 Glycine max Gma.13747.1.A1_at CD404869 - - 2e+0 At5g16120 hydrolase, alpha/beta fold family protein C.G. S.X.
0.04 1e+0 32 Hordeum vulgare HT05J08u_at HT05J08u - - 7e-2 At4g05070 unknown protein C.G. S.X.
0.05 4e+0 32 Oryza sativa OsAffx.31813.1.S1_x_at - - - 0 C.G. S.X.
0.04 7e-1 34 Populus trichocarpa PtpAffx.159365.1.A1_at CV275908 - - 3e-4 At3g48930 EMB1080 (embryo defective 1080) C.G. S.X.
0.06 2e+0 32 Triticum aestivum Ta.4995.2.S1_x_at CA736274 - - 6e-1 At3g06730 thioredoxin family protein C.G. S.X.
0.03 4e+0 30 Zea mays Zm.9482.1.A1_at BM269229 - - 5e+0 At5g50020 zinc finger (DHHC type) family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage