Gene omics information

Query gene ID	1617035_s_at
Gene name	hypothetical protein LOC100260266
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	93.6	1617035_s_at	CF205538.1	hypothetical protein LOC100260266	-	1e-10	At2g47180	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	S.X.	H.G.	Please select
0.83	94.6	1608907_s_at	CA809004	hypothetical protein LOC100260266	-	1e-30	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	S.X.	H.G.	Please select
0.67	87.9	1619733_at	CB342943	hypothetical protein LOC100243866	-	1e-7	At2g15020	unknown protein	S.X.	H.G.	Please select
0.67	87.9	1616248_at	CF203724.1	-	-	5e+0	At3g47430	PEX11B	S.X.	H.G.	Please select
0.46	66.5	1607468_at	CA809097	hypothetical protein LOC100261598	-	1e+0	At5g59160	TOPP2	S.X.	H.G.	Please select
0.32	43.1	1619127_at	CB340612	hypothetical protein LOC100264365	-	2e+0	At4g02075	PIT1 (pitchoun 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
21.3	99.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
16.1	99.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
13.1	99.8	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
11.9	99.8	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
11.3	99.7	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
11.3	99.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
11.0	99.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
9.5	99.6	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
7.8	99.3	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
6.7	99.0	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.27	6e-173	605	1608907_s_at	CA809004	hypothetical protein LOC100260266	-	1e-30	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	C.G.	S.X.	Please select
0.48	1e-60	232	1616372_at	CA810743	-	-	3e+0	At1g53930	ubiquitin family protein	C.G.	S.X.	Please select
0.15	5e-13	73	1609808_at	CB349851	hypothetical protein LOC100250305	-	8e-14	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select
0.09	1e-10	65	1612174_s_at	CD003870	-	-	7e-9	At5g23790	AtGolS5 (Arabidopsis thaliana galactinol synthase 5)	C.G.	S.X.	Please select
0.09	1e-10	65	1608229_s_at	CD003870	hypothetical protein LOC100244167	-	7e-9	At5g23790	AtGolS5 (Arabidopsis thaliana galactinol synthase 5)	C.G.	S.X.	Please select
0.05	3e-8	57	1621902_at	CB345928	hypothetical protein LOC100255485	-	4e-26	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select
0.07	3e-8	57	1620238_at	AF178569.1	-	-	8e-25	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select
0.07	3e-8	57	1616448_at	AF178569.1	-	-	8e-25	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select
0.11	1e-4	46	1619363_at	CA807930	-	-	1e-35	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	1e-10	67	Arabidopsis thaliana	At2g47180	819331	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.11	4e-17	89	Glycine max	Gma.5637.1.S1_at	AY126715.1	galactinol synthase	-	4e-24	At2g47180	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	C.G.	S.X.	Please select
0.11	3e-6	52	Hordeum vulgare	Contig3810_s_at	Contig3810	-	-	3e-18	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select
0.05	1e-8	61	Oryza sativa	Os03g0316200	AK071812.1	-	WSI76 protein induced by water stress	2e-22	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.23	2e-9	63	Populus trichocarpa	Ptp.5135.2.S1_at	CV231344	-	-	3e-9	At1g60470	AtGolS4 (Arabidopsis thaliana galactinol synthase 4)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	3e-5	50	Triticum aestivum	TaAffx.17365.1.S1_at	CK206695	-	-	1e-14	At1g56600	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	C.G.	S.X.	Please select
0.06	1e-2	40	Zea mays	Zm.12202.1.A1_at	BG549493	Galactinol synthase 1	-	3e-5	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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