Gene omics information

Query gene ID 1616898_at
Gene name hypothetical protein LOC100250567
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5879.81616898_atBQ796057hypothetical protein LOC100250567-4e-1At5g46013unknown proteinS.X.H.G.
0.9095.61608122_atCB982493hypothetical protein LOC100241637-4e-1At4g36100-S.X.H.G.
0.8695.11617756_atCB981493hypothetical protein LOC100253194-2e+1At5g57560TCH4 (Touch 4)S.X.H.G.
0.8494.81620959_s_atCB915151myb-relared transcription factor VvMYBA2-4e+0At5g19855unknown proteinS.X.H.G.
0.8494.81615798_atAB073013.1--1e-5At1g66370MYB113 (myb domain protein 113)S.X.H.G.
0.8293.91617171_s_atAF000371.1UDP glucose:flavonoid 3-o-glucosyltransferase-1e-2At5g17030UGT78D3 (UDP-GLUCOSYL TRANSFERASE 78D3)S.X.H.G.
0.8093.61616413_atAF003007.1VVTL1-4e-5At4g11650ATOSM34 (osmotin 34)S.X.H.G.
0.7892.61610071_atBQ797708hypothetical protein LOC100253046-2e-4At1g65680ATEXPB2 (ARABIDOPSIS THALIANA EXPANSIN B2)S.X.H.G.
0.7892.61618296_s_atCD711959--1e+0At2g01275zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.7390.81611457_atCD711959--1e+0At2g01275zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.0100.0GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
19.899.9GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
18.999.9GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
17.399.9GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
15.499.9GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
14.999.9GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
14.199.8GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
11.299.7GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
10.899.7GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
10.099.6GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-2381608545_atCF212467--3e-1At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)C.G.S.X.
0.031e-1361621521_atCF518960hypothetical protein LOC100245475 /// hypothetical protein LOC100252913 /// hypothetical protein LOC100253882-4e+0At4g14110COP9 (CONSTITUTIVE PHOTOMORPHOGENIC 9)C.G.S.X.
0.022e+0321622371_atCF518697hypothetical protein LOC100267229-5e-35At2g40600appr-1-p processing enzyme family proteinC.G.S.X.
0.022e+0321622064_atCF606041R2R3 Myb14 transcription factor-6e-1At1g50220unknown proteinC.G.S.X.
0.022e+0321614638_atCF202480.1--4e-7At4g00300fringe-related proteinC.G.S.X.
0.022e+0321614290_atCB342951hypothetical protein LOC100253525-1e-73At3g48420haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.022e+0321614287_atCF510757hypothetical protein LOC100243855-1e-16At2g20650zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e+0321613941_atCA818531hypothetical protein LOC100251097-2e+0At1g65390ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)C.G.S.X.
0.022e+0321613481_atCF202613.1--2e-6At1g78780pathogenesis-related family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-136Arabidopsis thalianaAt5g460136240521unknown proteinF:unknown;P:unknown;C:endomembrane system---C.G.S.X.
0.046e-446Glycine maxGma.3604.2.S1_s_atCF921163--9e-11At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeC.G.S.X.
0.038e-134Hordeum vulgareHVSMEk0010K24f_s_atHVSMEk0010K24f--3e-3At5g41430zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.042e-448Oryza sativaOs06g0165800AK065744.1-Caffeoyl-CoA O-methyltransferase 5 (EC 2.1.1.104)(Trans-caffeoyl-CoA 3-O-methyltransferase 5) (CCoAMT-5)(CCoAOMT-5)1e-7At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeC.G.S.X.
0.036e-136Populus trichocarpaPtpAffx.99537.1.S1_atDN500501--2e-1At5g27541C.G.S.X.
0.044e-136Triticum aestivumTaAffx.54234.1.S1_atCA684139--2e+0At5g58530glutaredoxin family proteinC.G.S.X.
0.042e-756Zea maysZm.3098.1.A1_atBM379893caffeoyl-CoA O-methyltransferase 1-7e-10At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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