Gene omics information

Query gene ID	1616843_at
Gene name	hypothetical protein LOC100252068
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.55	77.3	1616843_at	CF606887	hypothetical protein LOC100252068	-	7e-17	At4g18460	D-Tyr-tRNA(Tyr) deacylase family protein	S.X.	H.G.	Please select
0.78	92.6	1615727_at	CF205417.1	hypothetical protein LOC100261981	-	9e-2	At4g31470	pathogenesis-related protein, putative	S.X.	H.G.	Please select
0.72	89.7	1620211_at	CF513911	hypothetical protein LOC100261483	-	1e+0	At3g07565	DNA binding	S.X.	H.G.	Please select
0.70	88.6	1616023_at	CB979152	hypothetical protein LOC100252512	-	1e-38	At1g50140	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	S.X.	H.G.	Please select
0.61	83.2	1622086_at	CF207289	hypothetical protein LOC100265288	-	1e-1	At2g20480	unknown protein	S.X.	H.G.	Please select
0.59	80.6	1614958_at	CB347627	hypothetical protein LOC100241674	-	2e-6	At5g13050	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE)	S.X.	H.G.	Please select
0.58	79.8	1620802_at	CB976446	similar to putative pyruvate dehydrogenase E1 alpha subunit	-	3e-89	At1g01090	PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA)	S.X.	H.G.	Please select
0.56	79.4	1609080_at	BQ797210	hypothetical protein LOC100265018	-	9e-21	At5g54440	unknown protein	S.X.	H.G.	Please select
0.36	50.7	1608770_at	CF211789	-	-	6e-21	At3g60620	phosphatidate cytidylyltransferase family protein	S.X.	H.G.	Please select
0.36	50.7	1615943_at	CB971749	hypothetical protein LOC100266273	-	5e-14	At1g51980	mitochondrial processing peptidase alpha subunit, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.6	97.6	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
4.4	97.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.8	96.4	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
3.6	96.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
3.5	95.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.4	95.5	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.2	94.9	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
3.1	94.6	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
3.1	94.6	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.9	93.8	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	34	1615113_at	CF213771	hypothetical protein LOC100264151	-	8e-3	At3g10190	calmodulin, putative	C.G.	S.X.	Please select
0.02	1e+0	32	1620109_s_at	BQ796928	hypothetical protein LOC100243583	-	2e+0	At3g57930	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	32	1616505_a_at	CB981819	hypothetical protein LOC100262120	-	3e+0	At5g38060	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	32	1613415_at	AB074999.1	-	-	1e-11	At3g44990	XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8)	C.G.	S.X.	Please select
0.03	4e+0	30	1622735_s_at	CB340122	hypothetical protein LOC100256457	-	1e-6	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	C.G.	S.X.	Please select
0.03	4e+0	30	1620563_at	CD714913	-	-	3e-1	At5g62350	invertase/pectin methylesterase inhibitor family protein / DC 1.2 homolog (FL5-2I22)	C.G.	S.X.	Please select
0.03	4e+0	30	1618150_at	CF372200	hypothetical LOC100261619	-	9e-4	At4g25810	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	C.G.	S.X.	Please select
0.02	4e+0	30	1618048_at	CF516513	hypothetical protein LOC100264030	-	3e-11	At1g64460	phosphatidylinositol 3- and 4-kinase family protein	C.G.	S.X.	Please select
0.03	4e+0	30	1617622_at	CB975038	hypothetical protein LOC100254784	-	6e-5	At5g03330	OTU-like cysteine protease family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.29	7e-17	87	Arabidopsis thaliana	At4g18460	827578	D-Tyr-tRNA(Tyr) deacylase family protein	F:hydrolase activity, acting on ester bonds;P:D-amino acid catabolic process;C:cytoplasm;BOMFPA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.35	5e-25	115	Glycine max	Gma.1387.2.S1_at	BG508130	-	-	3e-7	At4g18460	D-Tyr-tRNA(Tyr) deacylase family protein	C.G.	S.X.	Please select
0.29	2e-18	91	Hordeum vulgare	Contig12844_at	Contig12844	-	-	7e+0	At5g50830	unknown protein	C.G.	S.X.	Please select
0.32	1e-26	121	Oryza sativa	Os01g0242500	NM_188723.1	-	D-tyrosyl-tRNA(Tyr) deacylase family protein	9e-16	At4g18460	D-Tyr-tRNA(Tyr) deacylase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.35	2e-45	182	Populus trichocarpa	PtpAffx.156454.1.S1_at	DN491281	-	-	6e-13	At4g18460	D-Tyr-tRNA(Tyr) deacylase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	2e+1	30	Triticum aestivum	TaAffx.81535.1.S1_at	CA684861	-	-	7e-2	At5g38650	proteasome maturation factor UMP1 family protein	C.G.	S.X.	Please select
0.12	1e-10	65	Zea mays	Zm.13818.1.S1_at	AY104633.1	-	-	9e-9	At4g18460	D-Tyr-tRNA(Tyr) deacylase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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