Gene omics information

Query gene ID	1616640_s_at
Gene name	hypothetical protein LOC100248388
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	89.5	1616640_s_at	CB969696	hypothetical protein LOC100248388	-	7e-6	At1g79260	unknown protein	S.X.	H.G.	Please select
0.50	72.7	1611012_at	CA816762	hypothetical protein LOC100264980	-	4e-4	At5g57580	calmodulin-binding protein	S.X.	H.G.	Please select
0.40	57.7	1617170_at	CF403242	hypothetical protein LOC100243828 /// hypothetical protein LOC100254631	-	7e-16	At3g07370	CHIP (CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN)	S.X.	H.G.	Please select
0.36	50.7	1611232_s_at	CF510701	hypothetical protein LOC100268014	-	5e+0	At5g10810	ATER	S.X.	H.G.	Please select
0.31	41.3	1621582_at	CB007952	hypothetical protein LOC100256349	-	1e-35	At5g48370	thioesterase family protein	S.X.	H.G.	Please select
0.19	20.9	1614412_s_at	CB971898	hypothetical protein LOC100243985	-	5e-1	At3g17160	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.1	99.1	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
5.1	98.1	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
4.8	97.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
4.5	97.5	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
4.2	97.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
3.5	95.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.4	95.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.3	95.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
3.1	94.6	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.1	94.6	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-1	34	1622751_s_at	CD712099	hypothetical protein LOC100255142	-	5e-31	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	C.G.	S.X.	Please select
0.03	5e-1	34	1621846_at	CF415605	-	-	7e-5	At4g26840	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)	C.G.	S.X.	Please select
0.02	5e-1	34	1619480_at	CF513488	hypothetical protein LOC100242124	-	2e-16	At1g31910	GHMP kinase family protein	C.G.	S.X.	Please select
0.02	5e-1	34	1611611_at	CB980376	hypothetical protein LOC100259980	-	1e-1	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.02	5e-1	34	1607842_at	CB980376	-	-	1e-1	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	C.G.	S.X.	Please select
0.03	2e+0	32	1618969_at	CD798426	hypothetical protein LOC100262654	-	2e-3	At2g42700	-	C.G.	S.X.	Please select
0.02	2e+0	32	1618411_at	CF208851	hypothetical protein LOC100261275	-	4e-20	At1g32700	zinc-binding family protein	C.G.	S.X.	Please select
0.02	2e+0	32	1610874_at	CA817036	-	-	1e+0	At5g08190	NF-YB12 (NUCLEAR FACTOR Y, SUBUNIT B12)	C.G.	S.X.	Please select
0.01	2e+0	32	1610061_at	CB982096	-	-	5e-49	At2g43790	ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.30	7e-6	52	Arabidopsis thaliana	At1g79260	844266	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMOP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.35	7e-47	188	Glycine max	GmaAffx.63044.2.S1_at	BG154309	-	-	2e-4	At1g79260	unknown protein	C.G.	S.X.	Please select
0.07	3e-3	42	Hordeum vulgare	Contig10973_at	Contig10973	-	-	6e-3	At1g79260	unknown protein	C.G.	S.X.	Please select
0.23	2e-7	57	Oryza sativa	Os01g0679600	AK062530.1	-	Conserved hypothetical protein	6e-3	At1g79260	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	1e-17	91	Populus trichocarpa	PtpAffx.86364.1.A1_a_at	CK097933	hypothetical protein	-	7e-2	At1g79260	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.08	7e-3	42	Triticum aestivum	Ta.5037.2.A1_a_at	CK215359	-	-	5e-3	At1g79260	unknown protein	C.G.	S.X.	Please select
0.10	3e-6	52	Zea mays	Zm.8528.1.S1_at	BM074548	THAP domain-containing protein 4	-	2e+0	At1g79260	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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