Gene omics information

Query gene ID 1616580_at
Gene name hypothetical protein LOC100260322
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.81616580_atCF206767.1hypothetical protein LOC100260322-2e+0At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)S.X.H.G.
0.5072.71613336_atCB980198hypothetical protein LOC100267659-1e-26At1g75510transcription initiation factor IIF beta subunit (TFIIF-beta) family proteinS.X.H.G.
0.4666.51622694_atCB979125hypothetical protein LOC100245090-2e-28At3g12760-S.X.H.G.
0.3345.71616553_s_atCF202023.1similar to KAK (KAKTUS)-3e-1At1g76220unknown proteinS.X.H.G.
0.2937.71610321_s_atCB980394hypothetical protein LOC100251531-9e-55At1g64230ubiquitin-conjugating enzyme, putativeS.X.H.G.
0.2530.51608223_atCB003799hypothetical protein LOC100257996-2e-15At3g07140GPI transamidase component Gpi16 subunit family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.397.2GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
4.096.7GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.996.6GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
3.896.4GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.696.0GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
3.696.0GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
3.495.5GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
3.395.2GSM287889Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
2.893.4GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initation
2.893.4GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initation
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-1341610271_atCF568914--2e-23At5g67100ICU2 (INCURVATA2)C.G.S.X.
0.022e+0321622257_atCF210952hypothetical protein LOC100261234-5e-23At1g72710CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)C.G.S.X.
0.022e+0321620004_x_atCF204829.1--5e-3At1g51080unknown proteinC.G.S.X.
0.022e+0321614340_atCF515454--2e+0At1g24485-C.G.S.X.
0.032e+0321611596_atCD715230--4e-62At2g25830YebC-relatedC.G.S.X.
0.022e+0321610690_atCF204829.1--5e-3At1g51080unknown proteinC.G.S.X.
0.032e+0321610294_atCF373126--4e-13At4g25835AAA-type ATPase family proteinC.G.S.X.
0.032e+0321608187_atCA817107hypothetical protein LOC100264171-1e-6At5g19400SMG7C.G.S.X.
0.032e+0321607821_atCD715230hypothetical protein LOC100245721-4e-62At2g25830YebC-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e+034Arabidopsis thalianaAt2g28910817440CXIP4 (CAX INTERACTING PROTEIN 4)Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria).---C.G.S.X.
0.059e-342Glycine maxGma.1780.1.S1_atBM892829--5e-12At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)C.G.S.X.
0.032e-136Hordeum vulgarebags30h06_atbags30h06--3e-10At2g24280serine carboxypeptidase S28 family proteinC.G.S.X.
0.023e+034Oryza sativaOsAffx.23260.1.S1_at---0C.G.S.X.
0.062e-344Populus trichocarpaPtpAffx.220023.1.S1_atpmrna36271hypothetical protein-3e-23At2g28910CXIP4 (CAX INTERACTING PROTEIN 4)C.G.S.X.
0.044e-136Triticum aestivumTaAffx.113538.1.S1_atCA609989--6e-1At3g58710WRKY69C.G.S.X.
0.031e+130Zea maysZmAffx.943.1.S1_atAI820396--2e+0At5g62290nucleotide-sensitive chloride conductance regulator (ICln) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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