CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID 1616264_at

Gene name hypothetical protein LOC100253432

Organism Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 90.8 1616264_at CB006693 hypothetical protein LOC100253432 - 9e-2 At3g57880 C2 domain-containing protein S.X. H.G.
0.57 79.8 1622111_at CB970952 hypothetical protein LOC100242512 - 1e-3 At3g04470 - S.X. H.G.
0.42 60.1 1611698_at CA812037 hypothetical protein LOC100263780 - 2e+0 At5g65360 histone H3 S.X. H.G.
0.36 50.7 1618930_at CF206622.1 hypothetical protein LOC100254102 - 2e+0 At4g24660 ATHB22 (HOMEOBOX PROTEIN 22) S.X. H.G.
0.33 45.7 1610556_at CF415554 hypothetical protein LOC100250209 - 4e+0 At5g23950 C2 domain-containing protein S.X. H.G.
0.24 28.7 1617131_at CF511594 hypothetical protein LOC100242326 - 2e+0 At1g54095 unknown protein S.X. H.G.
0.18 19.4 1611343_at CB974830 hypothetical protein LOC100261168 - 6e+0 At3g15210 ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4) S.X. H.G.
0.14 14.4 1610189_at CF211002 hypothetical protein LOC100257691 - 4e+0 At5g47830 unknown protein S.X. H.G.
0.12 12.1 1619013_at CF514808 hypothetical protein LOC100242671 - 3e-32 At1g03260 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.1 96.9 GSM436370 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
3.9 96.6 GSM436351 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
3.1 94.6 GSM436350 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.8 93.4 GSM436349 Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1 GSE17502 Photoperiod regulation of grape bud dormancy
2.7 93.0 GSM436347 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.6 92.5 GSM147735 Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation 64
2.5 91.9 GSM436372 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436348 Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 GSE17502 Photoperiod regulation of grape bud dormancy
2.4 91.3 GSM436371 Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2 GSE17502 Photoperiod regulation of grape bud dormancy
2.3 90.7 GSM147717 Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation 46
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 1e-99 361 1607427_at CF213911 hypothetical protein LOC100253432 - 1e-5 At4g00700 C2 domain-containing protein C.G. S.X.
0.07 1e-1 36 1621707_at CF512906 hypothetical protein LOC100252023 - 1e-49 At3g57880 C2 domain-containing protein C.G. S.X.
0.02 4e-1 34 1608384_at CB035975 hypothetical protein LOC100241094 - 1e-67 At5g03300 ADK2 (ADENOSINE KINASE 2) C.G. S.X.
0.02 2e+0 32 1616116_at CF604141 hypothetical protein LOC100268134 - 2e-21 At5g20250 DIN10 (DARK INDUCIBLE 10) C.G. S.X.
0.03 2e+0 32 1612237_at BQ795624 - - 8e-11 At4g24240 WRKY7 C.G. S.X.
0.03 2e+0 32 1612092_at CD011489 hypothetical protein LOC100264459 - 4e+0 At3g23710 chloroplast inner membrane import protein Tic22, putative C.G. S.X.
0.03 2e+0 32 1611621_at CF510760 hypothetical protein LOC100262627 - 2e+1 At5g41400 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 2e+0 32 1606440_at CB977937 - - 2e-11 At1g12470 Pep3/Vps18/deep orange family protein C.G. S.X.
0.02 7e+0 30 1620681_at CB001091 hypothetical protein LOC100244005 - 1e-9 At5g11330 monooxygenase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 9e-2 38 Arabidopsis thaliana At3g57880 824957 C2 domain-containing protein F:molecular_function unknown;P:tryptophan biosynthetic process;C:endoplasmic reticulum, cell wall;MPOF - - - C.G. S.X.
0.03 8e+0 32 Glycine max PsAffx.psHB028xC23f_at PsAffx.psHB028xC23f - - 1e+1 At5g28830 calcium-binding EF hand family protein C.G. S.X.
0.10 1e-5 50 Hordeum vulgare Contig8345_at Contig8345 - - 5e-12 At1g51570 C2 domain-containing protein C.G. S.X.
0.10 5e-5 50 Oryza sativa Os04g0683800 AK073897.1 - Phosphoribosylanthranilate transferase-likeprotein 9e-15 At3g57880 C2 domain-containing protein C.G. S.X.
0.35 1e-17 91 Populus trichocarpa PtpAffx.157889.1.S1_a_at DN485816 hypothetical protein - 2e-7 At4g11610 C2 domain-containing protein C.G. S.X.
0.08 2e+0 34 Triticum aestivum TaAffx.13004.1.S1_at BJ211609 - - 3e-13 At1g51570 C2 domain-containing protein C.G. S.X.
0.07 3e-3 42 Zea mays Zm.2702.1.A1_at AY107337.1 - - 7e-5 At5g12970 C2 domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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