Gene omics information

Query gene ID 1616189_at
Gene name hypothetical protein LOC100260741
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8695.11616189_atCF511570hypothetical protein LOC100260741-6e-18At1g75820CLV1 (CLAVATA 1)S.X.H.G.
0.4868.81612831_s_atCF201533.1H+-pyrophosphatase-5e-9At1g15690AVP1S.X.H.G.
0.3954.91622167_atCB007965hypothetical protein LOC100249144-9e-5At5g23410-S.X.H.G.
0.3954.91615292_atCF214583similar to oligopeptidase A-1e-37At5g10540peptidase M3 family protein / thimet oligopeptidase family proteinS.X.H.G.
0.3345.71616540_atCF414501hypothetical protein LOC100244175-3e-14At1g71865unknown proteinS.X.H.G.
0.3141.31622775_atCF415430hypothetical protein LOC100241371-3e-7At4g00570malate oxidoreductase, putativeS.X.H.G.
0.3039.41612742_s_atCF372931hypothetical protein LOC100260825-4e-3At1g51600TIFY2AS.X.H.G.
0.2937.71609313_atCF403611similar to 2-oxo acid dehydrogenase, lipoyl-binding site-6e-2At4g22320unknown proteinS.X.H.G.
0.2937.71618498_atCB008237hypothetical protein LOC100255416-7e-6At5g01980zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2937.71611783_atBQ792690hypothetical protein LOC100262520-1e+0At2g43570chitinase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.997.9GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
4.897.8GSM147701Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation30
3.896.4GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infection
3.796.2GSM147683Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation12
3.395.2GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
2.793.0GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.692.5GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM436359Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
2.390.7GSM147678Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation7
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-7561607524_atCF372095similar to receptor-like protein kinase 2-2e-19At5g65700BAM1 (BARELY ANY MERISTEM 1)C.G.S.X.
0.024e-1341613767_atBQ797892--2e+0At2g26670TED4 (REVERSAL OF THE DET PHENOTYPE 4)C.G.S.X.
0.022e+0321619431_atCD715997--3e-1At1g59535unknown proteinC.G.S.X.
0.022e+0321618961_atCD801645--1e+0At2g35612-C.G.S.X.
0.022e+0321615618_atCD715997--3e-1At1g59535unknown proteinC.G.S.X.
0.052e+0321607816_atCF216068hypothetical protein LOC100248686-1e-28At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.016e+0301616957_s_atCA808953hypothetical protein LOC100264047-9e-1At3g26140glycosyl hydrolase family 5 protein / cellulase family proteinC.G.S.X.
0.036e+0301615694_atBQ799849hypothetical protein LOC100257251-1e+0At5g39670calcium-binding EF hand family proteinC.G.S.X.
0.026e+0301613860_s_atCF512506cyc07-6e-38At3g0484040S ribosomal protein S3A (RPS3aA)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.086e-1891Arabidopsis thalianaAt1g75820843915CLV1 (CLAVATA 1)Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain.---C.G.S.X.
0.142e-34147Glycine maxGma.8484.1.S1_atAF197946.1receptor protein kinase-like protein-5e-13At1g75820CLV1 (CLAVATA 1)C.G.S.X.
0.101e-1479Hordeum vulgareContig13701_atContig13701--3e-12At3g49670BAM2 (BARELY ANY MERISTEM 2)C.G.S.X.
0.083e-21103Oryza sativaOs06g0717200AK111824.1-Leucine-rich repeat/receptor protein kinaseprecursor7e-12At3g49670BAM2 (BARELY ANY MERISTEM 2)C.G.S.X.
0.202e-58226Populus trichocarpaPtpAffx.201597.1.S1_atpmrna3143hypothetical protein-2e-27At1g75820CLV1 (CLAVATA 1)C.G.S.X.
0.079e-857Triticum aestivumTaAffx.59859.1.S1_atCA594375--2e-17At3g19300protein kinase family proteinC.G.S.X.
0.171e-35149Zea maysZm.1140.1.S1_atBM073428hypothetical protein LOC100279272-4e-14At3g49670BAM2 (BARELY ANY MERISTEM 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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