Gene omics information

Query gene ID	1616147_at
Gene name	hypothetical protein LOC100243192
Organism	Vitis vinifera

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.8	1616147_at	CF404954	hypothetical protein LOC100243192	-	2e-6	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	S.X.	H.G.	Please select
0.80	93.6	1606482_at	BQ796112	hypothetical protein LOC100243077	-	3e-10	At3g44830	lecithin:cholesterol acyltransferase family protein / LACT family protein	S.X.	H.G.	Please select
0.67	87.9	1612185_at	CB008768	hypothetical protein LOC100245556	-	3e-10	At5g66460	(1-4)-beta-mannan endohydrolase, putative	S.X.	H.G.	Please select
0.55	77.3	1620050_at	CB009432	hypothetical protein LOC100244027	-	1e-5	At5g17500	glycosyl hydrolase family 5 protein / cellulase family protein	S.X.	H.G.	Please select
0.50	72.7	1615374_at	CB911656	hypothetical protein LOC100241955	-	8e-1	At1g34000	OHP2 (ONE-HELIX PROTEIN 2)	S.X.	H.G.	Please select
0.38	53.6	1610428_at	CD012983	hypothetical protein LOC100263040	-	2e-4	At1g32090	early-responsive to dehydration protein-related / ERD protein-related	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
13.5	99.8	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
12.4	99.8	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
11.7	99.7	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
10.5	99.7	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
9.1	99.5	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.9	99.5	GSM287898	Red soft berry B14 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
8.8	99.5	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
8.8	99.5	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
8.4	99.4	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
8.3	99.4	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	1e-29	129	1619380_at	CF515301	hypothetical protein LOC100264975	-	2e-5	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	C.G.	S.X.	Please select
0.03	9e-3	40	1622513_at	CD009879	hypothetical LOC100255712	-	6e+0	At5g05760	SYP31 (SYNTAXIN OF PLANTS 31)	C.G.	S.X.	Please select
0.02	9e-3	40	1622639_at	CA810871	hypothetical protein LOC100254126	-	1e-4	At1g20440	COR47 (COLD-REGULATED 47)	C.G.	S.X.	Please select
0.03	9e-3	40	1620275_x_at	CF204388.1	-	-	1e-4	At5g66400	RAB18 (RESPONSIVE TO ABA 18)	C.G.	S.X.	Please select
0.03	9e-3	40	1619884_at	CD005438	-	-	9e-2	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	C.G.	S.X.	Please select
0.03	9e-3	40	1617303_at	CF204388.1	-	-	1e-4	At5g66400	RAB18 (RESPONSIVE TO ABA 18)	C.G.	S.X.	Please select
0.03	9e-3	40	1616110_at	CD005438	-	-	9e-2	At5g11260	HY5 (ELONGATED HYPOCOTYL 5)	C.G.	S.X.	Please select
0.03	9e-3	40	1615104_s_at	CF204388.1	hypothetical protein LOC100254126	-	1e-4	At5g66400	RAB18 (RESPONSIVE TO ABA 18)	C.G.	S.X.	Please select
0.04	9e-3	40	1610343_s_at	CB974266	-	-	3e+0	At2g03090	ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	2e-6	54	Arabidopsis thaliana	At2g26800	817221	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	F:hydroxymethylglutaryl-CoA lyase activity, catalytic activity;P:leucine metabolic process, metabolic process;C:mitochondrion;BOAFMP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.31	4e-36	153	Glycine max	GmaAffx.84721.1.S1_at	BQ297863	-	-	8e-25	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	C.G.	S.X.	Please select
0.03	9e-1	34	Hordeum vulgare	Contig1802_at	Contig1802	-	-	5e+0	At4g24265	unknown protein	C.G.	S.X.	Please select
0.09	2e-1	38	Oryza sativa	Os01g0269000	AK068875.1	-	Hydroxymethylglutaryl-CoA lyase	4e-6	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.51	1e-131	470	Populus trichocarpa	PtpAffx.206055.1.S1_at	pmrna12000	hypothetical protein	-	2e-18	At2g26800	hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	5e-1	36	Triticum aestivum	TaAffx.11763.1.A1_at	BQ170499	-	-	2e-1	At1g63120	ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)	C.G.	S.X.	Please select
0.11	2e-4	46	Zea mays	Zm.6728.1.A1_at	CN844413	hydroxymethylglutaryl-CoA lyase	-	4e-1	At1g62490	mitochondrial transcription termination factor-related / mTERF-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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