Gene omics information

Query gene ID 1616126_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6384.31616126_atCF203840.1--8e-11At2g38140PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4)S.X.H.G.
0.8093.61614054_atCF206745.1--4e-47At2g27960CKS1 (CYCLIN-DEPENDENT KINASE-SUBUNIT 1)S.X.H.G.
0.8093.61616230_x_atCF202354.1--2e+1At5g43510-S.X.H.G.
0.7792.31615753_atCF207576--2e-11At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.7591.31618907_x_atCF202612.1--4e+0At5g17470calmodulin-related protein, putativeS.X.H.G.
0.7189.51608322_x_atCF205688.1--7e-1At5g10890myosin heavy chain-relatedS.X.H.G.
0.6183.21609907_x_atCF201896.1--8e+0At5g50345-S.X.H.G.
0.5577.31609380_x_atCF203033.1--8e-10At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.199.9GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37
12.099.8GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49
12.099.8GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50
9.699.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57
9.399.6GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67
9.399.6GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39
8.899.5GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56
8.599.4GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38
8.199.4GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40
7.999.3GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.94010491617122_s_atCB916811hypothetical protein LOC100258002-8e-11At2g38140PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4)C.G.S.X.
0.039e-2361607464_atCF516938hypothetical protein LOC100253507-3e-30At5g35220EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)C.G.S.X.
0.021e+0321622547_atCF201768.1--1e-41At3g58610ketol-acid reductoisomeraseC.G.S.X.
0.021e+0321621838_atCD012562hypothetical protein LOC100244363-2e+0At5g23530AtCXE18 (Arabidopsis thaliana carboxyesterase 18)C.G.S.X.
0.011e+0321619691_atCF211807hexose transporter-like-2e-17At1g20840TMT1 (TONOPLAST MONOSACCHARIDE TRANSPORTER1)C.G.S.X.
0.031e+0321617667_atCF213861--1e+0At4g18510CLE2 (CLAVATA3/ESR-RELATED)C.G.S.X.
0.011e+0321610739_atCB001884--9e-1At4g31940CYP82C4C.G.S.X.
0.031e+0321607470_atCF511114hypothetical protein LOC100241526-7e-17At5g50280EMB1006 (embryo defective 1006)C.G.S.X.
0.011e+0321606891_atCB001884hypothetical protein LOC100257363-9e-1At4g31940CYP82C4C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.138e-1167Arabidopsis thalianaAt2g38140818392PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4)plastid-specific ribosomal protein 4 (PSRP4) mRNA, complete---C.G.S.X.
0.147e-961Glycine maxGma.16937.1.S1_atBI944977--2e-5At2g38140PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4)C.G.S.X.
0.051e-136Hordeum vulgareContig5708_atContig5708--1e+0At2g47280pectinesteraseC.G.S.X.
0.066e-136Oryza sativaOs05g0186000AK058675.1--1e+0At1g15220CCMHC.G.S.X.
0.147e-961Populus trichocarpaPtpAffx.9317.1.S1_atCV241750hypothetical protein-1e+0At4g14385-C.G.S.X.
0.045e+032Triticum aestivumTaAffx.104602.1.A1_atCA747176--2e+0At5g09780transcriptional factor B3 family proteinC.G.S.X.
0.032e+032Zea maysZm.14803.1.A1_atBM337022--1e+0At4g27790calcium-binding EF hand family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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