Gene omics information

Query gene ID 1616111_at
Gene name
Organism Vitis vinifera


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.61616111_atCD012364--1e-1At2g11773unknown proteinS.X.H.G.
0.2734.01615557_atCD721452--1e+0At3g57100unknown proteinS.X.H.G.
0.2124.01618733_atCB004465--7e-6At1g66970SVL2 (SHV3-LIKE 2)S.X.H.G.
0.1819.41610470_atCF202637.1--1e-7At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)S.X.H.G.
0.1718.21615924_atCD715417--2e-8At3g09970calcineurin-like phosphoesterase family proteinS.X.H.G.
0.1313.31620333_atCF608264--1e-10At3g08020protein binding / zinc ion bindingS.X.H.G.
0.1111.31607040_atCF568797--5e-24At1g54610protein kinase family proteinS.X.H.G.
0.066.81607773_atCD719602--2e-30At5g07290AML4 (ARABIDOPSIS MEI2-LIKE 4)S.X.H.G.
0.034.21612237_atBQ795624--8e-11At4g24240WRKY7S.X.H.G.
0.023.21608414_x_atCF204375.1--2e+0At1g48940plastocyanin-like domain-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.599.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancy
7.399.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39
5.898.6GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infection
4.697.6GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50
3.996.6GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51
3.996.6GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infection
3.595.7GSM436393V. riparia (VR, PI588259) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.595.7GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancy
3.194.6GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57
3.094.2GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.00020931612289_atCD012364hypothetical protein LOC100267301-1e-1At2g11773unknown proteinC.G.S.X.
0.022e-1361611117_atCF201368.1--1e-1At1g58170disease resistance-responsive protein-related / dirigent protein-relatedC.G.S.X.
0.026e-1341619710_atBM436446--2e-9At1g58170disease resistance-responsive protein-related / dirigent protein-relatedC.G.S.X.
0.026e-1341618663_s_atBM436446hypothetical protein LOC100263839-2e-9At1g58170disease resistance-responsive protein-related / dirigent protein-relatedC.G.S.X.
0.026e-1341615748_atCD801267--9e-4At5g65610unknown proteinC.G.S.X.
0.016e-1341614203_atCF518409hypothetical protein LOC100266138-2e-6At1g19860zinc finger (CCCH-type) family proteinC.G.S.X.
0.022e+0321622023_atCB970682--9e-2At5g08160ATPK3C.G.S.X.
0.022e+0321621698_atBQ796130similar to bHLH transcription factor Upa20-8e-2At3g20510unknown proteinC.G.S.X.
0.022e+0321621774_atCD715831--3e-5At4g14720PPD2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Arabidopsis thalianaAt2g117736241340unknown proteinF:unknown;P:unknown;C:unknown---C.G.S.X.
0.033e+034Glycine maxGmaAffx.86303.1.S1_atBG363105--8e-23At1g600803' exoribonuclease family domain 1-containing proteinC.G.S.X.
0.024e+032Hordeum vulgareEBpi01_SQ001_D04_atEBpi01_SQ001_D04--5e-1At2g16620protein kinase-relatedC.G.S.X.
0.021e+036Oryza sativaOs.56109.1.S1_at---0C.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.211739.1.S1_atpmrna23005hypothetical protein-1e+0At5g46730glycine-rich proteinC.G.S.X.
0.022e+034Triticum aestivumTa.21914.1.S1_atCA708496--2e-1At4g31115unknown proteinC.G.S.X.
0.024e+032Zea maysZm.8706.1.A1_atBM075281--4e+0At4g05050UBQ11 (UBIQUITIN 11)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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